basic visualization of hmm profile matches to multiple fasta files
-
Updated
Feb 17, 2017 - Python
basic visualization of hmm profile matches to multiple fasta files
Tools for performing I-ADHoRe co-linearity inference and visualization
AMRFinderPlus-Matrix contains script for processing the output files of AMRFinderPlus and generating a binary matrix that shows the presence or absence of antibiotic resistance genes, stress response genes, and virulence genes in each sample.
Generate GeneContent trees based on based the presence or absence of Genes from a given bacterial pan-genome using bidirectional BLAST results obtained with proteinortho
Structural variant calling and functional annotation in five mice lines selected for specific traits and a control line.
FishComparativeAtlas is a pipeline to trace the evolution of sister duplicated chromosomes derived from whole genome duplication in teleost genomes.
tairaccession python package for interaction with tair and analyzing arabidopsis genome.
Assemblies, MATA/MATB regions and source data from Peris et al 2022
Enables the calculation of phylogenies based on single copy core genome gene products, based on bidirectional BLAST results obtained with proteinortho
Calculates pairwise pocp values from proteinortho5 results.
Génomique comparative entre 3 génomes d'Enterococcus Cecorum
Topological data analysis for Comparative Genomics
Implements methods and scripts to compute a structure matrix from a multiple sequence alignment. Th
NASA GeneLab Open API
Code associé à un article dans Linux Magazine n°212 février 2018
Scripts created at CSU as a PhD student for genomic annotations and comparisons.
Génomique Comparée (Cours M2 AMI2B Paris-Saclay)
Add a description, image, and links to the comparative-genomics topic page so that developers can more easily learn about it.
To associate your repository with the comparative-genomics topic, visit your repo's landing page and select "manage topics."