Software for prediction of plasmid sequences in metagenomic assemblies
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Updated
Jun 28, 2021 - Python
Software for prediction of plasmid sequences in metagenomic assemblies
Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.
✨🧬 Refined binning of metagenomic contigs using assembly graphs
Simulate metagenomic short reads from one or more populations.
🚦🧬 Binning Metagenomic Contigs via Composition, Coverage and Assembly Graphs
Software to identify plasmid sequence data from metagenome using logistic regression and Minhash
Take information about snps on short sequence reads and accurately place the snps in a reference genome
Toolkit for binning FASTA, FASTQ and FAST5 files according to taxonomic annotation
☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs
Visualize read-to-contig alignment during assembly analysis
Compare and shuffle heterozygosity using BED and VCF files
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