☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs
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Updated
May 7, 2024 - Python
☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs
🚦🧬 Binning Metagenomic Contigs via Composition, Coverage and Assembly Graphs
✨🧬 Refined binning of metagenomic contigs using assembly graphs
Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.
Toolkit for binning FASTA, FASTQ and FAST5 files according to taxonomic annotation
Take information about snps on short sequence reads and accurately place the snps in a reference genome
Software for prediction of plasmid sequences in metagenomic assemblies
Compare and shuffle heterozygosity using BED and VCF files
Simulate metagenomic short reads from one or more populations.
Software to identify plasmid sequence data from metagenome using logistic regression and Minhash
Visualize read-to-contig alignment during assembly analysis
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