Pipeline developed during my MSc thesis: "Detection of Metagenomic Enzyme Variants of Biotechnological and Ecological Interest: The Case of Plastic-Degrading Enzymes"
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Updated
Jul 2, 2024 - Python
Pipeline developed during my MSc thesis: "Detection of Metagenomic Enzyme Variants of Biotechnological and Ecological Interest: The Case of Plastic-Degrading Enzymes"
Graph Analysis Course Notes
QM/DMD engine. Protein Hybrid Discrete Dynamics/DFT
Workflow for generate a database of proteins with quantum properties
MicrobeRX
Web scraper to retrieve protein data catalogued by the CAZy, UniProt, NCBI, GTDB and PDB websites/databases.
A way to extract specific information from CAZy
KIF - Key Interactions Finder. A python package to identify the key molecular interactions that regulate any conformational change.
A machine learning model for the prediction of optimal growth temperature of microorganisms and enzyme catalytic optima
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