Macros for FIJI in the FIJI Macro Language
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Updated
Mar 4, 2021 - ImageJ Macro
ImageJ is an open source Java image processing program inspired by NIH Image.
It runs on any computer with a Java 1.8 or later virtual machine.
Downloadable distributions are available for Windows, Mac OS X and Linux.
ImageJ has a strong, established user base, with thousands of plugins and macros for performing a wide variety of tasks.
Fiji is a "batteries-included" distribution of ImageJ, bundling many plugins which facilitate scientific image analysis.
Macros for FIJI in the FIJI Macro Language
This is a full macro for images analysis, cell count and co-staining cell count. Different options are available to analyse your image. You can count co-staining cell in unlimited number of images. the counting is done by size. There is an option to batch image analysis to save some time. You can personnalize the code and the analysis to maximiz…
Collection of macros for image processing in Fiji/ImageJ
FIJI/Image J macros created by NOBIC staff for microscopy facilities users
FIJI macros for Enrichment Analysis
ImageJ macro for image annotations
This repository is to share ImageJ/FIJI codes for post-processing images from FLEXIE microscope
Create random points in binary image and calculate number of points in objects of interest and distance to object of interest
Fiji macro that splits and merges multi-dimensional TIFFs.
ImageJ macros & tools for philately & raspberry pi camera
A collection of handy FIJI macros for image processing.
ImageJ macro to obtain binned intensity counts in single images, stacks or hyperstacks
ImageJ macro to plot results found in the results table.
Example scripts and macro demonstrating the Acquifer Java API in Fiji