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gating

Here are 3 public repositories matching this topic...

ciccalab / SIMPLI

SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.

life-sciences-image gating mcd ome-tiff imc histology image-analysis-workflows tissue-classification cell-segmentation bioimage-informatics bioimaging single-cell-analysis bioimage-analysis histological-images immunofluorescence bioimage-tools imaging-mass-cytometry tissue-analysis

Updated Jul 11, 2023
R

lance-waller-lab / gateR

Flow/Mass Cytometry Gating via Spatial Kernel Density Estimation

cran r rstats spatial-analysis r-package gating non-euclidean-spaces flow-cytometry mass-cytometry cytometry kernel-density-estimation cran-r rstats-package

Updated Jan 23, 2024
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nbroguiere / burgertools

Bundle of Useful scRNA-seq Gating Tools Extending seuRat

hashing rna-seq annotation variants filtering gating single-cell qc celltype seurat

Updated Dec 11, 2023
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