Detecting Regulatory Elements using GRO-seq and PRO-seq
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Updated
Feb 16, 2024 - R
Detecting Regulatory Elements using GRO-seq and PRO-seq
Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks
A “data light” TF-network mapping algorithm using only gene expression and genome sequence data.
An R package for multi-dimensional pathway enrichment analysis
Meta-analysis of DNA methylation in ART
Code for the research article "Exploring functional protein covariation across single cells using nPOP". It is distributed under MIT license.
R package to predict gene feed forward loops using mediation analysis. Analyses integrate observed miRNA and mRNA expression data and database information on gene interactions.
A resource of gene expression signatures derived from the DEE2 dataset (http://dee2.io)
simulating dysregulated gene expression in single cell transcriptome data
Research compendium for the preprint "Hierarchical Regulation of Autophagy During Adipocyte Differentiation"
Inferring ncRNA synergistic competition
An R package for multi-dimensional pathway enrichment analysis (legacy repo)
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