gillespie-algorithm

Here are 4 public repositories matching this topic...

qvhaelen / typhon

automatized generation of optimized Gillespie algorithm

dependency-graph data-structures binary-search-tree nonlinear-dynamics temporal-data kinetic-modeling reduction-strategies gillespie-algorithm pathway-models

Updated Aug 18, 2018
Fortran

voduchuy / KrylovFspSsa

Star

Fortran implementation of the Krylov-FSP-SSA algorithm for solving the Chemical Master Equation.

numerical-methods stochastic-simulation-algorithm gillespie-algorithm krylov-subspace-approximation chemical-master-equation stochastic-reaction-networks

Updated Jul 29, 2021
Fortran

PhyBi / miRNA-negative-feedback

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This repository contains code for simulatuing 'miRNA-mediated negative feedback loop' model, given in the manuscript 'Effects of miRNA-mediated negative feedback on gene expression', using Gillespie algorithm

gene-expression stochastic-simulation-algorithm gillespie-algorithm

Updated Nov 9, 2022
Fortran

wcota / dynSIS

Star

Implementation of SIS epidemic model for large and heterogeneous networks using Fortran.

fortran networkx computational-physics complex-networks epidemics stochastic-processes stochastic-simulation-algorithm markovian-epidemic-processes gillespie-algorithm markovian-processes

Updated Sep 15, 2024
Fortran

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gillespie-algorithm

Here are 4 public repositories matching this topic...

qvhaelen / typhon

voduchuy / KrylovFspSsa

PhyBi / miRNA-negative-feedback

wcota / dynSIS

Improve this page

Add this topic to your repo