Bayesian haplotype-based mutation calling
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Updated
Aug 12, 2023 - C++
Bayesian haplotype-based mutation calling
Viral quasispecies assembly via maximal clique finding. A method to reconstruct viral haplotypes and detect large insertions and deletions from NGS data.
A Novel Computational Method Based on Genetic Algorithms for Haplotype Assembly
Smart and Accurate Polishing of Phase Haplotypes Integrating Read Enhancements (SAPPHIRE)
Create a set of reference-guided multiple-aligned haplotypes or founder sequences from a variant call file and a reference sequence.
Calculate SMD and Hamming and Jaccard distances between each pair of samples in a set of variant files.
PBWT-based algorithm for identifying all Maximal Perfect Haplotype Blocks with Wildcards
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