📓 Pretty Darn Good Control: applications in optimal control

Code for the IJMS paper (Co-Expression Network Analysis of AMPK and Autophagy Gene Products during Adipocyte Differentiation)

Code for the Cancers paper (Functional Linkage of RKIP to the Epithelial to Mesenchymal Transition and Autophagy during the Development of Prostate Cancer)

Analysis of geographic patterns in the climate sensitivity of lakes using LAGOS-NE

An example of using make for a data analysis project

Quantifying the contribution of citizen science to broad‐scale ecological databases

Lake connectivity for aquatic and semi-aquatic species

Repo for MS: "Relative model fit does not predict topological accuracy in single-gene protein phylogenetics"

Scripts, data, and supplementary information associated with the bioRxiv preprint "Evolutionary drivers of hyper-variable sexual signals in slender anoles".

Source files for reproducing results reported in the manuscript "Causal Mediation Analysis for Stochastic Interventions" (I. Diaz & N.S. Hejazi, JRSS-B, 2020)

Manuscript in support of prewas software

Supplemental material for Redfors, Björn, et al. "The win ratio approach for composite endpoints: practical guidance based on previous experience." European Heart Journal (2020). This repo contains R functions that approximate the sample size for a two-arm clinical trial based on a composite endpoint analyzed using the Win Ratio.

Ecological prediction at macroscales using big data: Does sampling design matter?

Index measures for oak decline severity using phenotypic descriptors

Scripts, data, and supplementary information associated with the manuscript "Evolutionary drivers of sexual signal variation in Amazon slender anoles".

Data and scripts from the manuscript: Gene expression and epigenetics reveal species-specific mechanisms acting upon common molecular pathways in the evolution of task division in bees

Code, data and manuscript for "Fernández-Pascual (2021) SylvanSeeds, a seed germination database for temperate deciduous forests. Journal of Vegetation Science." https://doi.org/10.1111/jvs.12960

Data and codes for the manuscript "Effect of specific non-pharmaceutical intervention policies on SARS-CoV-2 transmission in the counties of the United States".

A study on the assemblage composition of sea snakes in bycatch of fisheries on the west coast of India

Supplementary Material of manuscript, and Cutoff Finding R script