mlst
Here are 11 public repositories matching this topic...
Fast k-mer based tool for multi locus sequence typing (MLST)
-
Updated
Sep 3, 2020 - Python
List and download schemes from pubMLST.org and other BIGSDB servers
-
Updated
Apr 11, 2024 - Python
cg/wgMLST allele calling software, schema evaluation and allele distance estimation for outbreak reserch.
-
Updated
May 2, 2024 - Python
Epitypification pipeline for clinical NGS data. Written in NextFlow, Python & Bash.
-
Updated
Apr 8, 2022 - Python
A tool for conducting a gene screen on assemblies, producing an SRST2-like output.
-
Updated
Dec 28, 2022 - Python
MetaMLST is a computational tool for in-silico Multi-Locus Sequence Typing from metagenomic data.
-
Updated
Mar 2, 2023 - Python
multi-locus sequence type clade classifier for Clostridioides difficile
-
Updated
Mar 30, 2024 - Python
mlst2dist.py computes a distance matrix from a chewBBACA MLST alleles table, using Hamming Distance modified with correction for missing data
-
Updated
Apr 19, 2022 - Python
In silico taxonomic classification of Bacillus cereus group genomes using whole-genome sequencing data
-
Updated
May 8, 2024 - Python
Improve this page
Add a description, image, and links to the mlst topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the mlst topic, visit your repo's landing page and select "manage topics."