Here are
19 public repositories
matching this topic...
Extracting Patients' information from clinical notes and export them to an OMOP CDM database.
Updated
Jul 14, 2021
Python
OMOP standardization pipeline for ICU databases
Updated
Jul 3, 2024
Python
eds-scikit is a Python library providing tools to process and analyse OMOP data
Updated
Jun 27, 2024
Python
Convenient And Reusable Rapid Omop Transformer.
Updated
Sep 25, 2024
Python
The OMOP Common Data Model(v6) implemented in Django (v3)
Updated
Jan 26, 2021
Python
FHIR to OMOP using PySpark on AWS Glue
Updated
May 8, 2021
Python
An ETL pipeline to transform your EMP data to OMOP.
Updated
Sep 18, 2024
Python
Load OHDSI Vocab from Athena into PostgreSQL DB
Updated
Aug 2, 2024
Python
Federated summary algorithm for a RDB following the OMOP CDM and using Vantage6
Updated
Aug 14, 2023
Python
The work of OMOP on the dbt for demo in OHDSI Symposium 2022
Updated
Oct 23, 2022
Python
This pilot project deploys a supplemental OMOP table to map external measures of rurality (RUCC and RUCA).
Updated
May 3, 2021
Python
SQLAlchemy Declarative Mapping Models for OHDSI OMOP CDM
Updated
Sep 25, 2024
Python
Script to convert OMOP NOTE table to NOTE_NLP table
Updated
Aug 16, 2024
Python
Updated
Jun 25, 2021
Python
Translational Computational Phenotyping
Updated
May 22, 2023
Python
A tool for backing up OHDSI WebAPI cohorts in a git repository
Updated
Jul 8, 2024
Python
omopsurvey python package
Updated
May 14, 2024
Python
Deletion of unwanted content from OMOP CDM
Updated
Feb 7, 2024
Python
Custom Airflow operators and hooks, that help to upload our raw hospital data to Google Cloud.
Updated
Sep 10, 2024
Python
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