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paralogs

Here are 4 public repositories matching this topic...

Rinoahu / SwiftOrtho

A high performance tool to identify orthologs and paralogs across genomes.

genome cluster protein-sequences orthology-inference orthologs orthology-relationships paralogs

Updated Mar 8, 2023
Python

edgardomortiz / Captus

Assembly of Phylogenomic Datasets from High-Throughput Sequencing data

bioinformatics rna-seq ngs next-generation-sequencing phylogenetics alignment high-throughput-sequencing hybridization-capture phylogenomics whole-genome-sequencing orthologs paralogs genome-skimming phylotranscriptomics target-capture busco-orthologs busco-lineages

Updated Apr 10, 2024
Python

Arkadiy-Garber / ParaHunter

Identification of gene paralogs in genomes, and calculation of dS and dN/dS values for paralogous gene pairs

duplicates codeml paml paralogs gene-paralogs

Updated Feb 28, 2023
Python

vivekruhela / miRPipe

miRPipe: Open source RNA-Seq bioinformatics analysis docker for identification of miRNAs and piRNAs

docker pirna rna-seq-pipeline paralogs

Updated Aug 11, 2023
Python

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