PD-1 Targeted Antibody Discovery Using AI Protein Diffusion
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Updated
Apr 15, 2024 - Shell
PD-1 Targeted Antibody Discovery Using AI Protein Diffusion
The specification of the MMTF format for biological structures
A pipeline for AlphaFold2-Multimer on a SLURM compute cluster with visualization in ChimeraX.
Rather brute optimizer for negative image-based models
The central entry point to the P2Rank project with links to the individual projects, including references to documentation, datasets, etc.
A 3D-equivariant neural network for protein structure accuracy estimation
PaCS-MD (Parallel cascade selection molecular dynamics)
Code used for our paper, Variable Regions of p53 Isoforms Allosterically Hard Code DNA Interaction
Dataset of the "Integrative Modeling of Membrane-associated Protein Assemblies" manuscript
This script calculates the PockDrug descriptors of a protein pocket.
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