Proteomics label-free quantification (LFQ) analysis pipeline
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Updated
May 9, 2024 - Nextflow
Proteomics label-free quantification (LFQ) analysis pipeline
Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification.
Quantitative mass spectrometry workflow.
Repository of Nextflow+BioContainers workflows
Automated quantitative analysis of DIA proteomics mass spectrometry measurements.
A NextFlow pipeline for chromatogram library DIA proteomics workflows
The ProteoGenomics database generation workflow creates different protein databases for ProteoGenomics data analysis.
DeepRescore: rescore PSMs leveraging deep learning-derived peptide features
Quantitative shotgun MS proteomics
ProteomeGenomics Database Creation - Nextflow Pipeline
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