Nextflow pipeline for short-read alignment
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Updated
May 25, 2023 - Nextflow
Nextflow pipeline for short-read alignment
A nextflow pipeline to calculate depth of coverage from a metagenomic set of bins
A nextflow pipeline for calling and annotating small germline variants from short DNA reads for WES and WGS data
A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region expansions (RREs) from short DNA reads
A pipeline to identify (and remove) certain sequences from raw genomic data. Default taxa to identify (and remove) are Homo and Homo sapiens. Removal is optional.
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