Generic Snakemake profile to set up SLURM integration
-
Updated
Nov 16, 2021 - Python
Generic Snakemake profile to set up SLURM integration
Quick guide to submitting and monitoring jobs on Ozerlabs slurm cluster.
Common functions and infrastructure built during my phd projects
Slurm Job Samples encapsulate GPU resources
This workflow performs a metatranscriptomics and bulk RNAseq analysis from the sequencing output data to the differential expression analyses.
An implementation based on SLURM and OpenMPI for big data handling using a Raspberry Pi cluster
🧰 ToolKit to launch COMOKIT on HPC
This is an importable python package that provides an Enum containing SLURM sbatch/srun environment variables.
Not the slurm job dispatcher you need, but the one you deserve.
Control your SLURM jobs via SSH using Python (WORK IN PROGRESS)
A Python package to manage protein design workflows on computing clusters and local machines. Documentation can be found here: https://protflow.readthedocs.io/en/latest/
A small helper tool to manage SLURM job creation / submission in a more pythonic way.
Generalized submit command for slurm / moabs
A simple tool to perform parameter sweeps on SLURM clusters.
Efficient Datamodules Customized for the Mila / CC clusters
Slurm job submission in Python
ML model to predict SPARQL query execution times from time series data
Add a description, image, and links to the slurm-cluster topic page so that developers can more easily learn about it.
To associate your repository with the slurm-cluster topic, visit your repo's landing page and select "manage topics."