R functions for project setup, data cleaning, machine learning, SuperLearner, parallelization, and targeted learning.
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Updated
Jul 23, 2024 - R
R functions for project setup, data cleaning, machine learning, SuperLearner, parallelization, and targeted learning.
slurmR: A Lightweight Wrapper for Slurm
Intermedate Slurm Workshop source code using the Software Carpentry Workbench style.
SCAS dashboard: A tool to intuitively and interactively analyze Slurm cluster usage
Tools for computation on batch systems
🚀 R package future.batchtools: A Future API for Parallel and Distributed Processing using batchtools
Convert Mass Spectrometry Files using msconvert, singularity and SLURM
Testing parallel file creation using SLURM
Repo to demonstrate how to launch parallelized array job in Slurm
Public Code Samples by Peter Watson
RNA-seq alignment and analysis pipeline
Workshop on HPC with Slurm, R, and the slurmR package
🚀 R package: future.BatchJobs: A Future API for Parallel and Distributed Processing using BatchJobs [Intentionally archived on CRAN on 2021-01-08]
R package for talking to the HPC cluster at the University of Cologne
🌊 16S rRNA microbiome data analysis workflow using DADA2 and R on a high performance cluster using SLURM
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