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snp-data

Here are 5 public repositories matching this topic...

dabne003 / Unsupervised-Machine-Learning

Principal Component Analysis, PCA, Gaussian Markov Random Fields, Graphical model,

snps pca graphical-models phenotypes principal-component-analysis snp-data unsupervised-machine-learning plant-breeding guassian-markov-random-fields clustering-hierarchy

Updated Mar 24, 2018
R

YaoLab-Bioinfo / ECOGEMS

Efficient compression and retrieve of genotype data with integer sparse matrices

shiny shiny-apps genotype sparse-matrices snp-data

Updated Aug 11, 2023
R

Simulate_a_SNP_Pair

hrmazumder / Simulate_a_SNP_Pair

Simulation of a pair of Single Nucleotide Polymorphisms (SNPs) and associated binary response (e.g., disease status) based on real SNP data in R.

bioinformatics simulation snp-data single-nucleotide-polymorphisms

Updated Nov 19, 2023
R

SinomeM / QCtreeCNV

Powerful CNV calls filtering pipeline. Focused on fixed loci calling, before visual inspection.

r cnv snp-data cnv-analysis

Updated Dec 4, 2023
R

privefl / bigsnpr

R package for the analysis of massive SNP arrays.

bioinformatics r big-data parallel-computing statistical-methods r-package memory-mapped-file snp-data polygenic-scores population-structure-inference

Updated Sep 24, 2024
R

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