This GitHub repository contains code and data for a assignment investigating the brain's auditory networks using functional Magnetic Resonance Imaging (fMRI).
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Updated
Mar 13, 2024 - MATLAB
This GitHub repository contains code and data for a assignment investigating the brain's auditory networks using functional Magnetic Resonance Imaging (fMRI).
This repository suggests an organized pipeline for spatial preprocessing of fMRI data (both task-based and resting-state).
This repository contains batch scripts to standardise and automate the processing of single echo (SE-fMRI), multi-echo (ME-fMRI) fMRI and VBM data in SPM12.
CAT12 image denoising as a Docker container
Tutorial covering group DCM analyses of fMRI and M/EEG
Command line automation of SPM
SPM tools for preprocessing fMRI series: slice time correction for fMRI scans using Simultaneous MultiSlice (SMS) / MultiBand / HyperBand and echo combination for Multi Echo EPI
TMFC toolbox - a new SPM toolbox for whole-brain task-modulated functional connectivity (TMFC) analysis with user-friendly graphical interface.
Lesion Segmentation Tool by Paul Schmidt (https://www.applied-statistics.de/lst.html)
Rapid and automated conversion of neuroimaging data to BIDS
SPM implementation of https://github.com/JosePMarques/MP2RAGE-related-scripts
Public Releases of SPM12 - see https://github.com/spm/spm for the Development Version
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