Matlab code for Bayesian Network Component Analysis
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Updated
Nov 11, 2015 - MATLAB
Matlab code for Bayesian Network Component Analysis
Collection of scripts for enhancing humanGEM based models with kinetic and proteomics constraints and specialized simulation utilities.
Determination of product-growth-coupled strain designs employing stoichiometric metabolic models.
Matlab implementation of automated model reduction of biochemical reaction networks
Get concentration ranges for metabolites with structurally constrained concentrations (SCC).
Principles and applications of systems biology (ChE-411) 2019-20
The modeling code used for Manole et al, Canc Res, 2016.
Matlab code for resource balance analysis
picCASO is a MATLAB package to simulate the dynamics of spatial patterning of a microbial consortium on a 2-dimensional surface.
Benchmarks of the gpuZoo implementations.
The codes of Drylab Team, iGEM ITB 2017 to support the wetlab.
The Repository for the paper "Kinetic modelling of β-cell metabolism reveals control points in the insulin-regulating pyruvate cycling pathways"
Code for transformation of Matlab/Simbiology model to JSON format
Simple devices and software to facilitate microscopy, electrophysiology, and microbiology techniques for systems neuroscience research. Easy to fabricate and use with low-cost 3D Printers.
Matlab code and example models for model balancing
Matlab code for replicate time series regression
A prior learning and sampling model informed tool for learning with Single Cell RNA-Seq data
Command-line program and scheduled GitHub action for publishing the ModelDB model repository to BioSimulations
Icahn Graduate School of Medicine: Systems Biology & Biotechnology Specialization
Computational modeling of the short term pattern of cellular responses to epidermal growth factor
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