Calculate SMD and Hamming and Jaccard distances between each pair of samples in a set of variant files.
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Mar 5, 2018 - C++
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variant-analysis
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Create a set of reference-guided multiple-aligned haplotypes or founder sequences from a variant call file and a reference sequence.
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Nov 12, 2024 - C++
High-level API for storing and querying sequence variant data
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May 24, 2019 - C++
a C++ API of htslib to be easily integrated and safely used. More importantly, it can be callled seamlessly in R/Python/Julia etc.
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Sep 26, 2024 - C++
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