High-level API for storing and querying sequence variant data
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Updated
May 24, 2019 - C++
High-level API for storing and querying sequence variant data
a C++ API of htslib to be easily integrated and safely used. More importantly, it can be callled seamlessly in R/Python/Julia etc.
Create a set of reference-guided multiple-aligned haplotypes or founder sequences from a variant call file and a reference sequence.
Calculate SMD and Hamming and Jaccard distances between each pair of samples in a set of variant files.
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