OpenMMLab Semantic Segmentation Toolbox and Benchmark.
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Updated
May 26, 2024 - Python
OpenMMLab Semantic Segmentation Toolbox and Benchmark.
TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, Inc.
pytorch implementation of paper https://www.frontiersin.org/articles/10.3389/fcomp.2020.00035/full
[MICCAI'21] [Tensorflow] Retinal Vessel Segmentation using a Novel Multi-scale Generative Adversarial Network
Diabetic Retinopathy Feature Extraction and Binary Diagnosis
Sequential vessel segmentation via deep channel attention network
The code in this repository is from my master thesis. This project aims to automatically segment carotid from 3D MR brain image, and use the segmented carotid to extract Time-Activity-Curve from PET images. It mainly involves 3D image coregistration, vessel segmentation, partial valume correction.
Applying Octave UNet for Retinal Vessel Segmentation.
An example of easytorch implementation on retinal vessel segmentation.
OIR Segmentation
a simple and easy to follow pytorch implementation of U-net for retina vessel segmentation
🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes
A high-performance deep-learning-based pipeline for whole-brain vasculature segmentation at the capillary resolution
[CMPB] Official implementation of "BSEResU-Net: An attention-based before-activation residual U-Net for retinal vessel segmentation"
Code for our paper "Exploring The Limits Of Data Augmentation For Retinal Vessel Segmentation". https://arxiv.org/abs/2105.09365
3D Slicer Vesselness Filters CLI Extension
Diabetic Retinopathy using Patch Networks.
[MICCAI 2022 Best Paper Finalist] Bayesian Pseudo Labels: Expectation Maximization for Robust and Efficient Semi Supervised Segmentation
MATLAB GUIs for ToF-MRA data preprocessing, cerebrovascular segmentation and quantification
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