build(deps): bump the noodles group with 6 updates #432
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Bumps the noodles group with 6 updates: | Package | From | To | | --- | --- | --- | | [noodles-bgzf](https://github.com/zaeleus/noodles) | `0.26.0` | `0.28.0` | | [noodles-csi](https://github.com/zaeleus/noodles) | `0.30.0` | `0.32.0` | | [noodles-fasta](https://github.com/zaeleus/noodles) | `0.33.0` | `0.35.0` | | [noodles-tabix](https://github.com/zaeleus/noodles) | `0.36.0` | `0.38.0` | | [noodles-vcf](https://github.com/zaeleus/noodles) | `0.49.0` | `0.52.0` | | [seqrepo](https://github.com/varfish-org/seqrepo-rs) | `0.10.0` | `0.10.1` | Updates `noodles-bgzf` from 0.26.0 to 0.28.0 - [Commits](zaeleus/noodles@noodles-bgzf-0.26.0...noodles-bgzf-0.28.0) Updates `noodles-csi` from 0.30.0 to 0.32.0 - [Commits](zaeleus/noodles@noodles-csi-0.30.0...noodles-csi-0.32.0) Updates `noodles-fasta` from 0.33.0 to 0.35.0 - [Commits](zaeleus/noodles@noodles-fasta-0.33.0...noodles-fasta-0.35.0) Updates `noodles-tabix` from 0.36.0 to 0.38.0 - [Commits](zaeleus/noodles@noodles-tabix-0.36.0...noodles-tabix-0.38.0) Updates `noodles-vcf` from 0.49.0 to 0.52.0 - [Commits](zaeleus/noodles@noodles-vcf-0.49.0...noodles-vcf-0.52.0) Updates `seqrepo` from 0.10.0 to 0.10.1 - [Release notes](https://github.com/varfish-org/seqrepo-rs/releases) - [Changelog](https://github.com/varfish-org/seqrepo-rs/blob/main/CHANGELOG.md) - [Commits](varfish-org/seqrepo-rs@v0.10.0...v0.10.1) --- updated-dependencies: - dependency-name: noodles-bgzf dependency-type: direct:production update-type: version-update:semver-minor dependency-group: noodles - dependency-name: noodles-csi dependency-type: direct:production update-type: version-update:semver-minor dependency-group: noodles - dependency-name: noodles-fasta dependency-type: direct:production update-type: version-update:semver-minor dependency-group: noodles - dependency-name: noodles-tabix dependency-type: direct:production update-type: version-update:semver-minor dependency-group: noodles - dependency-name: noodles-vcf dependency-type: direct:production update-type: version-update:semver-minor dependency-group: noodles - dependency-name: seqrepo dependency-type: direct:production update-type: version-update:semver-patch dependency-group: noodles ... Signed-off-by: dependabot[bot] <support@github.com>
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Superseded by #436. |
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Bumps the noodles group with 6 updates:
0.26.00.28.00.30.00.32.00.33.00.35.00.36.00.38.00.49.00.52.00.10.00.10.1Updates
noodles-bgzffrom 0.26.0 to 0.28.0Commits
4f72542Bump versions for noodles 0.67.059d8097sam/io/reader: Add example for Reader::recordsc3f9878sam/io/writer/header/record/value/map: Add value validation3b3e750bam/io/reader/record: Disallow partial block sizesda145c6bgzf/async/block_codec: Allow final frame to be incompletedc5919aBump versions for noodles 0.66.051a824fbam/record/data/field/value/array/values: Fix value count calculationb194d59bgzf/writer: Fix the default visibility of CompressionLevelImple9b4101htsget: Update to base64 0.22.0f80ac45bgzf/multithreaded_writer: Add builderUpdates
noodles-csifrom 0.30.0 to 0.32.0Commits
4f72542Bump versions for noodles 0.67.059d8097sam/io/reader: Add example for Reader::recordsc3f9878sam/io/writer/header/record/value/map: Add value validation3b3e750bam/io/reader/record: Disallow partial block sizesda145c6bgzf/async/block_codec: Allow final frame to be incompletedc5919aBump versions for noodles 0.66.051a824fbam/record/data/field/value/array/values: Fix value count calculationb194d59bgzf/writer: Fix the default visibility of CompressionLevelImple9b4101htsget: Update to base64 0.22.0f80ac45bgzf/multithreaded_writer: Add builderUpdates
noodles-fastafrom 0.33.0 to 0.35.0Commits
4f72542Bump versions for noodles 0.67.059d8097sam/io/reader: Add example for Reader::recordsc3f9878sam/io/writer/header/record/value/map: Add value validation3b3e750bam/io/reader/record: Disallow partial block sizesda145c6bgzf/async/block_codec: Allow final frame to be incompletedc5919aBump versions for noodles 0.66.051a824fbam/record/data/field/value/array/values: Fix value count calculationb194d59bgzf/writer: Fix the default visibility of CompressionLevelImple9b4101htsget: Update to base64 0.22.0f80ac45bgzf/multithreaded_writer: Add builderUpdates
noodles-tabixfrom 0.36.0 to 0.38.0Commits
4f72542Bump versions for noodles 0.67.059d8097sam/io/reader: Add example for Reader::recordsc3f9878sam/io/writer/header/record/value/map: Add value validation3b3e750bam/io/reader/record: Disallow partial block sizesda145c6bgzf/async/block_codec: Allow final frame to be incompletedc5919aBump versions for noodles 0.66.051a824fbam/record/data/field/value/array/values: Fix value count calculationb194d59bgzf/writer: Fix the default visibility of CompressionLevelImple9b4101htsget: Update to base64 0.22.0f80ac45bgzf/multithreaded_writer: Add builderUpdates
noodles-vcffrom 0.49.0 to 0.52.0Commits
6508087Bump versions for noodles 0.68.00559afdUpdate to reqwest 0.12.2c29a697readme: Use cargo add00f53a0vcf/variant/record_buf/samples/sample/value/genotype: Remove Deref and DerefMut9cf3a64vcf/variant/record_buf/samples/sample/value/genotype: Replace fallible conver...6a972a3vcf/io/writer/record/samples/sample/value/genotype: Add versioned writers985b660vcf/variant/record_buf/filters: Add examples50d88a6vcf/variant/record_buf: Update descriptions4c83dcevcf/variant/record: Add variant span8d68016vcf/io/reader/record_buf/quality_score: Add source to invalid parse errorUpdates
seqrepofrom 0.10.0 to 0.10.1Release notes
Sourced from seqrepo's releases.
Changelog
Sourced from seqrepo's changelog.
Commits
aada2fechore(main): release 0.10.1 (#101)6d6c1e2build(deps): bump the noodles group with 1 update (#97)1e0974cbuild(deps): update rusqlite requirement from 0.30 to 0.31 (#96)4b6e531build(deps): bump actions/add-to-project from 0.5.0 to 0.6.0 (#98)19eb0d6fix: use column for seqid alias query (#100)Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting
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