Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Print final.contigs.fa assembly statistics at end of log #45

Closed
tseemann opened this issue Jun 21, 2015 · 1 comment
Closed

Print final.contigs.fa assembly statistics at end of log #45

tseemann opened this issue Jun 21, 2015 · 1 comment

Comments

@tseemann
Copy link

It would be very useful to have the assembly statistics at the end of the log.

For example the ``<<< HERE` line below:

--- [Sun Jun 21 11:18:12 2015] Assembling contigs from SdBG for k = 99 ---
--- [Sun Jun 21 11:18:17 2015] Merging to output final contigs ---
--- [Sun Jun 21 11:18:17 2015] 129 contigs, min 203 bp, max 127311 bp, N50 53121 bp --- <<< HERE
--- [Sun Jun 21 11:18:17 2015] ALL DONE. Time elapsed: 67.086014 seconds ---
voutcn added a commit that referenced this issue Jun 22, 2015
@voutcn
Copy link
Owner

voutcn commented Jun 23, 2015

Modified as suggested & closing this issue.

@voutcn voutcn closed this as completed Jun 23, 2015
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants