Use this program to convert the results of a Crux (search-for-xlinks) cross-linking analysis to Proxl XML suitable for import into the proxl web application.
- Download the latest release.
- Run the program
java -jar crux2ProxlXML.jar
with no arguments to see the possible parameters. - Run the program, e.g.,
java -jar crux2ProxlXML.jar -r ./crux-output -f yeast.fasta -l dss -m 138.0680742 -o ./output.proxl.xml
In the above example, output.proxl.xml
will be created and be suitable for import into proxl.
For more information on importing data into Proxl, please see the Proxl Import Documentation.
For more information about Proxl, visit http://proxl-ms.org/.