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1. ScisTree ScisTree Public

   Cell tree inference and genotype calling from noisy single cell data

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2. GTmix GTmix Public

   GTmix: Inference of population admixture network from local gene genealogies under coalescent theory

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3. STELLS2 STELLS2 Public

   Coalescent-based maximum likelihood inference of species tree from gene tree topologies

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4. PedMix PedMix Public

   PedMix: software for ancestral inference of single admixed individual

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5. SPRDist SPRDist Public

   Software tool for computing distance between phylogenetic trees

6. PIRN PIRN Public

   Parsimonious construction of phylogenetic networks from gene trees