v2.0.0

V2.0.0:

• Addition of FOF-vol-CT.
• Major updates to table names, organization and format.
• Changed order of tables.
• Added downloadable Template tables for FOF-vol-CT to facilitate adoption.
• Eliminated discrepancies in documentation.
• Multiple minor revisions to improve readability and consistency.
• To know more details of the FOF-CT format, please visit ReadTheDocs

Templates and examples of the FOF-bas-CT and FOF-vol-CT tables, respectively (V2.0.0 release) can be downloaded via

• templates_bas_examples_v2.0.0.zip file.
• templates_vol_examples_v2.0.0.zip file.

The following are short step-by-step instructions of how to use these templates (along with examples):

1. Download the appropriate Templates package for your deposition.
2. Select the templates for the tables to be utilized:

• For FOF-bas-CT download the template for the :ref:core and any other of the 11 supplementary :ref:BAS-table-reference-label you might need for your deposition.
• For FOF-vol-CT download the template for the :ref:vol-core and any other of the 2 supplementary :ref:VOL-table-reference-label as well as the 11 supplementary :ref:BAS-table-reference-label you might need for your deposition.

3. Save the downloaded tables locally in CSV or in one of the other allowable tabular formats.
4. Fill in all indicated values in the Header section of each template
5. Cut and paste the data columns below the Header section in a comma-separated format.
6. Save the filled-in templates in the same format described in Point 2.
7. Follow the instructions of your desired repository administrator for uploading and sharing.

V1.0.0

V1.0.0:

• Major updates to table names, organization and format.
• Added provisions to describe Chromatin Tracing results in case of the presense of IN/DEL in the genome.
• Changed order of tables.
• Added downloadable Template tables to facilitate adoption.
• Improved description and documentation.
• Multiple minor revisions to improve readability and consistency.

To know more details of the FOF-CT format, please visit ReadTheDocs

• Templates and examples of the FOF-CT tables (V1.0.0 release) can be downloaded via templates_examples_v1.0.0.zip file.
• To use the templates (along with examples), please follow instructions below:
  1. Download the Templates package
  2. Select the templates for the tables to be utilized and save them locally in CSV or in one of the other allowable tabular formats.
  3. Fill in all indicated values in the Header section of each template
  4. Cut and paste the data columns below the Header section in a comma-separated format.
  5. Save the filled in templates in the same format described in Point 2.
  6. Follow the instructions of your data curator for uploading and sharing.

v0.1.0

Merge pull request #28 from 4dn-dcic/3-22-2022_Changes

3-22-2022 PR_Debugged Quality table header and Example