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v0.4.2

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@BioCael-Dev BioCael-Dev released this 31 Mar 06:17
· 22 commits to main since this release
v0.4.2
15d08f8

Summary

Feature release focused on turning the BLAST search workflow into a more usable reporting tool with structured summaries, top-hit ranking, and improved machine-readable output.

Highlights

  • Added BLAST outfmt 6 parsing for structured hit processing
  • Added ranked search summaries with:
    • total hit count
    • best hit selection
    • top-hit lists
    • best identity / bitscore / minimum e-value
  • Added --top N to control how many hits are summarized
  • Added TUI top-hit table rendering with rich.table
  • Expanded JSON output to include summary.best_hit, summary.top_hits, and aggregate statistics
  • Updated README / README_CN examples and bumped project version to v0.4.2

Compatibility

  • Python 3.9+
  • Conda recommended for installing BLAST+ tools
  • Search workflow currently targets nucleotide search via blastn
  • Raw BLAST tabular output is still preserved in the TSV result file

Assets

  • install.sh
  • install.sh.sha256
  • BioFlow-CLI-v0.4.2-backup.tar.gz
  • BioFlow-CLI-v0.4.2-backup.tar.gz.sha256

Open Source

BioFlow-CLI is an open-source project released under the MIT License.

Assets 6
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