slorado-v0.7.0

What's Changed

• new experimental --async yes|no option that runs I/O, CPU and GPU work at the same time (the reads will be unordered in the output)
• experimental support for rna004_sup@v6.0.0 basecalling model and rna004_sup@v6.0.0_m6A_DRACH@v1 modification calling model

Full Changelog: v0.6.0...v0.7.0

Binary downloads

Direct binary download links:
https://cdn.bioinf.science/slorado/slorado-v0.7.0-x86_64-cuda-linux-binaries.tar.xz
https://cdn.bioinf.science/slorado/slorado-v0.7.0-x86_64-rocm-linux-binaries.tar.xz

Note that you can download from the assets below as well; however, ROCM binaries are in parts, which you need to concatenate before extraction: cat file.tar.xz.part0 file.tar.xz.part1 > file.tar.xz && tar xf file.tar.xz

Models

This version supports the following basecalling models:

• dna_r10.4.1_e8.2_400bps_fast@v5.0.0, dna_r10.4.1_e8.2_400bps_hac@v5.0.0, dna_r10.4.1_e8.2_400bps_sup@v5.0.0
• rna004_130bps_fast@v5.1.0, rna004_130bps_hac@v5.1.0, rna004_130bps_sup@v5.1.0
• rna004_sup@v6.0.0

This version supports the following modification-calling models (experimental):

• dna_r10.4.1_e8.2_400bps_hac@v5.0.0_5mCG_5hmCG@v3, dna_r10.4.1_e8.2_400bps_sup@v5.0.0_5mCG_5hmCG@v3
• rna004_sup@v6.0.0_m6A_DRACH@v1