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Horizontal regridding and stabilizing CATKE features #2881

Merged
merged 71 commits into from
Mar 17, 2023
Merged

Horizontal regridding and stabilizing CATKE features #2881

merged 71 commits into from
Mar 17, 2023

Commits on Jan 26, 2023

  1. Add regridding in x

    @glwagner
    glwagner committed Jan 26, 2023
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Commits on Jan 30, 2023

  1. Fixes fine-graining regridding

    @glwagner
    glwagner committed Jan 30, 2023
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  2. Better masking syntax

    @glwagner
    glwagner committed Jan 30, 2023
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Commits on Feb 14, 2023

  1. Limit CATKE mixing lengths by true depth not Lz

    @glwagner
    glwagner committed Feb 14, 2023
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Commits on Feb 17, 2023

  1. Cosmetic change

    @glwagner
    glwagner committed Feb 17, 2023
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Commits on Feb 22, 2023

  1. Add max diffusivity to CATKE

    @glwagner
    glwagner committed Feb 22, 2023
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Commits on Feb 23, 2023

  1. Whats different about vertical regridding?

    @glwagner
    glwagner committed Feb 23, 2023
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  2. Merge branch 'glw/more-general-regridding' of https://github.com/CliM… 

    …A/Oceananigans.jl into glw/more-general-regridding
    @glwagner
    glwagner committed Feb 23, 2023
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  3. Fix sign error in geopotential hight for points outside the domain

    @glwagner
    glwagner committed Feb 23, 2023
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  4. Fixes regridding bugs

    @glwagner
    glwagner committed Feb 23, 2023
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  5. Fix regridding bugs

    @glwagner
    glwagner committed Feb 23, 2023
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Commits on Mar 2, 2023

  1. Merge branch 'main' into glw/more-general-regridding

    @glwagner
    glwagner committed Mar 2, 2023
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  2. Missing artifact

    @glwagner
    glwagner committed Mar 2, 2023
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Commits on Mar 7, 2023

  1. Merge remote-tracking branch 'origin/main' into glw/more-general-regr… 

    …idding
    @glwagner
    glwagner committed Mar 7, 2023
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Commits on Mar 10, 2023

  1. Fix bug with maximum_diffusivity feature

    @glwagner
    glwagner committed Mar 10, 2023
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Commits on Mar 13, 2023

  1. Fix minor bug in buoyancy flux

    @glwagner
    glwagner committed Mar 13, 2023
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  2. Restrict vertically implicit diffusion solver to one vertically impli… 

    …cit closure
    @glwagner
    glwagner committed Mar 13, 2023
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  3. Cosmetic changes

    @glwagner
    glwagner committed Mar 13, 2023
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  4. Update CATKE parametrers

    @glwagner
    glwagner committed Mar 13, 2023
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Commits on Mar 14, 2023

  1. Update windy convection

    @glwagner
    glwagner committed Mar 14, 2023
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  2. Updates

    @glwagner
    glwagner committed Mar 14, 2023
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  3. Stabilizing CATKE plus new show method

    @glwagner
    glwagner committed Mar 14, 2023
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  4. Merge branch 'main' into glw/more-general-regridding

    @glwagner
    glwagner committed Mar 14, 2023
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  5. Clean up vertical mixing validation scripts

    @glwagner
    glwagner committed Mar 14, 2023
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  6. nonblocking immersed masking in nonhydrostatic model

    @glwagner
    glwagner committed Mar 14, 2023
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  7. Merge branch 'main' into glw/more-general-regridding

    @glwagner
    glwagner committed Mar 14, 2023
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  8. Adds back total_depth

    @glwagner
    glwagner committed Mar 14, 2023
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  9. Merge branch 'main' into glw/more-general-regridding

    @glwagner
    glwagner committed Mar 14, 2023
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  10. New node syntax in regridding

    @glwagner
    glwagner committed Mar 14, 2023
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  11. Back to more than one closure tuple

    @glwagner
    glwagner committed Mar 14, 2023
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Commits on Mar 15, 2023

  1. New mask_immersed_field! syntax

    @glwagner
    glwagner committed Mar 15, 2023
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  2. Update Project.toml

    @glwagner
    glwagner committed Mar 15, 2023
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  3. better docs for SplitExplicit

    @navidcy
    navidcy committed Mar 15, 2023
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  4. back to v0.80.0

    @navidcy
    navidcy committed Mar 15, 2023
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  5. Update src/TurbulenceClosures/turbulence_closure_implementations/CATK… 

    …EVerticalDiffusivities/CATKEVerticalDiffusivities.jl
    @navidcy
    navidcy committed Mar 15, 2023
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  6. Update src/BuoyancyModels/nonlinear_equation_of_state.jl

    @navidcy
    navidcy committed Mar 15, 2023
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  7. Update src/ImmersedBoundaries/mask_immersed_field.jl 

    Co-authored-by: Simone Silvestri <33547697+simone-silvestri@users.noreply.github.com>
    @glwagner @simone-silvestri
    glwagner and simone-silvestri committed Mar 15, 2023
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  8. Update src/ImmersedBoundaries/mask_immersed_field.jl 

    Co-authored-by: Simone Silvestri <33547697+simone-silvestri@users.noreply.github.com>
    @glwagner @simone-silvestri
    glwagner and simone-silvestri committed Mar 15, 2023
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  9. Update src/ImmersedBoundaries/mask_immersed_field.jl 

    Co-authored-by: Simone Silvestri <33547697+simone-silvestri@users.noreply.github.com>
    @glwagner @simone-silvestri
    glwagner and simone-silvestri committed Mar 15, 2023
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  10. Update src/TurbulenceClosures/turbulence_closure_implementations/CATK… 

    …EVerticalDiffusivities/CATKEVerticalDiffusivities.jl

Co-authored-by: Navid C. Constantinou <navidcy@users.noreply.github.com>
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    glwagner and navidcy committed Mar 15, 2023
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  11. Update src/Models/HydrostaticFreeSurfaceModels/update_hydrostatic_fre… 

    …e_surface_model_state.jl

Co-authored-by: Simone Silvestri <33547697+simone-silvestri@users.noreply.github.com>
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    glwagner and simone-silvestri committed Mar 15, 2023
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  12. Update src/ImmersedBoundaries/mask_immersed_field.jl 

    Co-authored-by: Simone Silvestri <33547697+simone-silvestri@users.noreply.github.com>
    @glwagner @simone-silvestri
    glwagner and simone-silvestri committed Mar 15, 2023
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  13. Update src/ImmersedBoundaries/mask_immersed_field.jl 

    Co-authored-by: Simone Silvestri <33547697+simone-silvestri@users.noreply.github.com>
    @glwagner @simone-silvestri
    glwagner and simone-silvestri committed Mar 15, 2023
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  14. Update src/ImmersedBoundaries/mask_immersed_field.jl 

    Co-authored-by: Simone Silvestri <33547697+simone-silvestri@users.noreply.github.com>
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    glwagner and simone-silvestri committed Mar 15, 2023
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  15. Update src/ImmersedBoundaries/mask_immersed_field.jl 

    Co-authored-by: Simone Silvestri <33547697+simone-silvestri@users.noreply.github.com>
    @glwagner @simone-silvestri
    glwagner and simone-silvestri committed Mar 15, 2023
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  16. Update src/ImmersedBoundaries/mask_immersed_field.jl 

    Co-authored-by: Simone Silvestri <33547697+simone-silvestri@users.noreply.github.com>
    @glwagner @simone-silvestri
    glwagner and simone-silvestri committed Mar 15, 2023
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  17. Update src/ImmersedBoundaries/mask_immersed_field.jl 

    Co-authored-by: Simone Silvestri <33547697+simone-silvestri@users.noreply.github.com>
    @glwagner @simone-silvestri
    glwagner and simone-silvestri committed Mar 15, 2023
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  18. Remove comments from windy convection validation test

    @glwagner
    glwagner committed Mar 15, 2023
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  19. Merge branch 'main' into glw/more-general-regridding

    @glwagner
    glwagner committed Mar 15, 2023
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  20. Fix bug in mask_immersed_field

    @glwagner
    glwagner committed Mar 15, 2023
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  21. Implement exact conservative regridding for lat lon

    @glwagner
    glwagner committed Mar 15, 2023
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  22. Add regridding validations

    @glwagner
    glwagner committed Mar 15, 2023
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  23. Add area calculations for Flat topologies

    @glwagner
    glwagner committed Mar 15, 2023
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  24. Use lower-level searchsortedfirst

    @glwagner
    glwagner committed Mar 15, 2023
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  25. Remove comment

    @glwagner
    glwagner committed Mar 15, 2023
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  26. Validate regridding on GPU

    @glwagner
    glwagner committed Mar 15, 2023
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  27. Fix mask immersed field issue

    @glwagner
    glwagner committed Mar 15, 2023
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  28. Merge branch 'glw/more-general-regridding' of https://github.com/CliM… 

    …A/Oceananigans.jl into glw/more-general-regridding
    @glwagner
    glwagner committed Mar 15, 2023
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  29. Cosmetic

    @glwagner
    glwagner committed Mar 15, 2023
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  30. quick bugfix

    @simone-silvestri
    simone-silvestri committed Mar 15, 2023
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Commits on Mar 16, 2023

  1. Import mask_immersed_field_xy

    @glwagner
    glwagner committed Mar 16, 2023
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  2. Implement mask immersed field for non-immersed grids

    @glwagner
    glwagner committed Mar 16, 2023
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  3. Fallback for mask immersed field xy

    @glwagner
    glwagner committed Mar 16, 2023
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  4. Why does update_state dispatch on grid?

    @glwagner
    glwagner committed Mar 16, 2023
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  5. Update src/ImmersedBoundaries/mask_immersed_field.jl 

    Co-authored-by: Simone Silvestri <33547697+simone-silvestri@users.noreply.github.com>
    @glwagner @simone-silvestri
    glwagner and simone-silvestri committed Mar 16, 2023
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  6. Fix bounds error in regridding

    @glwagner
    glwagner committed Mar 16, 2023
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  7. Unblock mask immersed field xy

    @glwagner
    glwagner committed Mar 16, 2023
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  8. Generalize regridding

    @glwagner
    glwagner committed Mar 16, 2023
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  9. Add fallback for mask_immersed_field

    @glwagner
    glwagner committed Mar 16, 2023
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Commits on Mar 17, 2023

  1. More falbacks

    @glwagner
    glwagner committed Mar 17, 2023
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  2. Update vertically_implicit_diffusion_solver.jl

    @glwagner
    glwagner committed Mar 17, 2023
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