Better docstring rendering

docs/oceananigans.bib

@@ -210,7 +210,7 @@ @article{White05
 @article{Orszag86,
 	title = {Boundary conditions for incompressible flows},
 	volume = {1},
-	doi = {10/cz7cqj},
+	doi = {10.1007/BF01061454},
 	number = {1},
 	journal = {Journal of Scientific Computing},
 	author = {Orszag, Steven A. and Israeli, Moshe and Deville, Michel O.},
@@ -221,7 +221,7 @@ @article{Orszag86
 @article{Brown01,
 	title = {Accurate projection methods for the incompressible Navier--Stokes equations},
 	volume = {168},
-	doi = {10/djz53c},
+	doi = {10.1006/jcph.2001.6715},
 	number = {2},
 	journal = {Journal of Computational Physics},
 	author = {Brown, David L. and Cortez, Ricardo and Minion, Michael L.},
@@ -243,7 +243,7 @@ @incollection{Arakawa77
 @article{Harlow65,
 	title = {Numerical calculation of time-dependent viscous incompressible flow of fluid with free surface},
 	volume = {8},
-	doi = {10/bbr7hb},
+	doi = {10.1063/1.1761178},
 	number = {12},
 	journal = {Physics of Fluids},
 	author = {Harlow, Francis H. and Welch, J. Eddie},
@@ -301,13 +301,14 @@ @article{Dellar2011
   volume={674},
   pages={174},
   year={2011},
-  publisher={Cambridge University Press}
+  publisher={Cambridge University Press},
+  doi={10.1017/S0022112010006464}
 }
 
 @article{Hockney65,
 	title = {A fast direct solution of {Poisson}'s equation using {Fourier} analysis},
 	volume = {12},
-	doi = {10/fvv8tk},
+	doi = {10.1145/321250.321259},
 	journal = {Journal of the ACM},
 	author = {Hockney, R. W.},
 	year = {1965},
@@ -317,7 +318,7 @@ @article{Hockney65
 @article{Schumann88,
 	title = {Fast {Fourier} transforms for direct solution of {Poisson}'s equation with staggered boundary conditions},
 	volume = {75},
-	doi = {10/fdkvqq},
+	doi = {10.1016/0021-9991(88)90102-7},
 	journal = {Journal of Computational Physics},
 	author = {Schumann, Ulrich and Sweet, Roland A},
 	year = {1988},
@@ -339,7 +340,7 @@ @incollection{Hockney69
 @article{Swarztrauber77,
 	title = {The methods of cyclic reduction, {Fourier} analysis and the {FACR} algorithm for the discrete solution of {Poisson}’s equation on a rectangle},
 	volume = {19},
-	doi = {10/bnxtr7},
+	doi = {10.1137/1019071},
 	number = {3},
 	journal = {SIAM Review},
 	author = {Swarztrauber, Paul N.},
@@ -350,7 +351,7 @@ @article{Swarztrauber77
 @article{Temperton79,
 	title = {Direct methods for the solution of the discrete {Poisson} equation: {Some} comparisons},
 	volume = {31},
-	doi = {10/dnbhsw},
+	doi = {10.1016/0021-9991(79)90059-7},
 	journal = {Journal of Computational Physics},
 	author = {Temperton, Clive},
 	year = {1979},
@@ -360,7 +361,7 @@ @article{Temperton79
 @article{Temperton80,
 	title = {On the {FACR}$(\ell)$ algorithm for the discrete {Poisson} equation},
 	volume = {34},
-	doi = {10/fs55st},
+	doi = {10.1016/0021-9991(80)90092-3},
 	number = {3},
 	journal = {Journal of Computational Physics},
 	author = {Temperton, Clive},
@@ -394,7 +395,7 @@ @inproceedings{Frigo98
 @article{Makhoul80,
 	title = {A fast cosine transform in one and two dimensions},
 	volume = {28},
-	doi = {10/ffwxmd},
+	doi = {10.1109/TASSP.1980.1163351},
 	journal = {IEEE Transactions on Acoustics, Speech, and Signal Processing},
 	author = {Makhoul, J.},
 	year = {1980},
@@ -414,7 +415,7 @@ @article{Shu09
 @incollection{Shu98,
 	address = {Berlin, Heidelberg},
 	title = {Essentially non-oscillatory and weighted essentially non-oscillatory schemes for hyperbolic conservation laws},
-	doi = {https://doi.org/10.1007/BFb0096355},
+	doi = {10.1007/BFb0096355},
 	booktitle = {Advanced numerical approximation of nonlinear hyperbolic equations},
 	publisher = {Springer Berlin Heidelberg},
 	author = {Shu, Chi-Wang},
@@ -528,7 +529,7 @@ @article{Chou45
 @article{Corrsin61,
 	title = {Turbulent flow},
 	volume = {49},
-	url = {http://www.jstor.org.libproxy.mit.edu/stable/27827853},
+	url = {https://www.jstor.org/stable/27827853},
 	number = {3},
 	journal = {American Scientist},
 	author = {Corrsin, S.},
@@ -550,7 +551,7 @@ @incollection{Leonard75
 @article{Smagorinsky63,
 	title = {General circulation experiments with the primitive equations {I}. {The} basic experiment},
 	volume = {91},
-	doi = {10/bhd6ks},
+	doi = {10.1175/1520-0493(1963)091<0099:GCEWTP>2.3.CO;2},
 	number = {3},
 	journal = {Monthly Weather Review},
 	author = {Smagorinsky, J.},
@@ -595,23 +596,24 @@ @article{Deardorff74
 	journal = {Boundary-Layer Meteorology},
 	author = {Deardorff, J. W.},
 	year = {1974},
-	pages = {81--106}
+	pages = {81--106},
+	doi = {10.1007/BF00224974}
 }
 
 @article{Pope04,
 	title = {Ten questions concerning the large-eddy simulation of turbulent flows},
 	volume = {6},
-	doi = {10/b68fj9},
 	journal = {New Journal of Physics},
 	author = {Pope, Stephen B},
 	year = {2004},
-	pages = {35--35}
+	pages = {35--35},
+	doi = {10.1088/1367-2630/6/1/035}
 }
 
 @article{Rozema15,
 	title = {Minimum-dissipation models for large-eddy simulation},
 	volume = {27},
-	doi = {10/f7qckv},
+	doi = {10.1063/1.4928700},
 	number = {8},
 	journal = {Physics of Fluids},
 	author = {Rozema, Wybe and Bae, Hyun J. and Moin, Parviz and Verstappen, Roel},
@@ -663,7 +665,7 @@ @article{Burggraf66
 @article{Bruneau06,
 	title = {The {2D} lid-driven cavity problem revisited},
 	volume = {35},
-	doi = {10/fvshbk},
+	doi = {10.1016/j.compfluid.2004.12.004},
 	number = {3},
 	journal = {Computers \& Fluids},
 	author = {Bruneau, Charles-Henri and Saad, Mazen},
@@ -674,7 +676,7 @@ @article{Bruneau06
 @article{Botella98,
 	title = {Benchmark spectral results on the lid-driven cavity flow},
 	volume = {27},
-	doi = {10/chbd5b},
+	doi = {10.1016/S0045-7930(98)00002-4},
 	number = {4},
 	journal = {Computers \& Fluids},
 	author = {Botella, O. and Peyret, R.},
@@ -685,7 +687,7 @@ @article{Botella98
 @article{Erturk05,
 	title = {Numerical solutions of 2-{D} steady incompressible driven cavity flow at high {Reynolds} numbers},
 	volume = {48},
-	doi = {10/dxb23c},
+	doi = {10.1002/fld.953},
 	number = {7},
 	journal = {International Journal for Numerical Methods in Fluids},
 	author = {Erturk, E. and Corke, T. C. and Gökçöl, C.},
@@ -718,7 +720,7 @@ @article{Vreugdenhil18
 @article{Deusebio15,
 	title = {The intermittency boundary in stratified plane {Couette} flow},
 	volume = {781},
-	doi = {10/f7rvqh},
+	doi = {10.1017/jfm.2015.497},
 	journal = {Journal of Fluid Mechanics},
 	author = {Deusebio, Enrico and Caulfield, C. P. and Taylor, J. R.},
 	year = {2015},
@@ -800,11 +802,11 @@ @article{Sod78
 }
 
 @article{Hill1894,
-	title = {On a spherical vortex},
+	author = {Hill, Micaiah John Muller  and Henrici, Olaus Magnus Friedrich Erdmann},
+	title = {VI. On a spherical vortex},
 	volume = {185},
-	doi = {10/bqp7mk},
+	doi = {10.1098/rsta.1894.0006},
 	journal = {Philosophical Transactions of the Royal Society A},
-	author = {Hill, Micaiah John Muller},
 	year = {1894},
 	pages = {213--245}
 }
@@ -855,7 +857,7 @@ @article{Flierl87
 @article{Kerr96,
 	title = {Rayleigh number scaling in numerical convection},
 	volume = {310},
-	doi = {10/drzq2n},
+	doi = {10.1017/S0022112096001760},
 	journal = {Journal of Fluid Mechanics},
 	author = {Kerr, Robert M.},
 	year = {1996},
@@ -876,10 +878,8 @@ @article{Roquet15Idealized
 @article{Roquet15TEOS,
 	title = {Accurate polynomial expressions for the density and specific volume of seawater using the {TEOS}-10 standard},
 	volume = {90},
-	issn = {14635003},
-	url = {https://linkinghub.elsevier.com/retrieve/pii/S1463500315000566},
-	doi = {10/f7dx6m},
-	journal = {Ocean Modelling},
+	doi = {10.1016/j.ocemod.2015.04.002},
+	journal = {Ocean Modeling},
 	author = {Roquet, F. and Madec, G. and McDougall, Trevor J. and Barker, Paul M.},
 	year = {2015},
 	pages = {29--43}
@@ -896,22 +896,25 @@ @article{Wagner23catke
 @article{leith1968diffusion,
   title={Diffusion approximation for two-dimensional turbulence},
   author={Leith, Cecil E},
-  journal={The Physics of Fluids},
+  journal={Physics of Fluids},
   volume={11},
   number={3},
   pages={671--672},
   year={1968},
   doi={10.1063/1.1691968}
 }
 
-@article{Fox-Kemper2008,
-  title={Can large eddy simulation techniques improve mesoscale rich ocean models?},
-  author={Fox-Kemper, B and Menemenlis, D},
-  journal={Washington DC American Geophysical Union Geophysical Monograph Series},
-  volume={177},
-  pages={319--337},
-  year={2008},
-  doi={10.1029/177GM19}
+
+@inbook{Fox-Kemper2008,
+	author = {Fox-Kemper, B. and Menemenlis, D.},
+	publisher = {American Geophysical Union (AGU)},
+	isbn = {9781118666432},
+	title = {Can large eddy simulation techniques improve mesoscale rich ocean models?},
+	booktitle = {Ocean Modeling in an Eddying Regime},
+	chapter = {},
+	pages = {319-337},
+	doi = {10.1029/177GM19},
+	year = {2008},
 }
 
 @article{Pearson2017,
@@ -953,3 +956,14 @@ @book{Press1992
   address={Cambridge, UK},
   publisher={Cambridge University Press}
 }
+
+@article{Shchepetkin2005,
+  title={The regional oceanic modeling system (ROMS): a split-explicit, free-surface, topography-following-coordinate oceanic model},
+  author={Shchepetkin, Alexander F and McWilliams, James C},
+  journal={Ocean modelling},
+  volume={9},
+  number={4},
+  pages={347--404},
+  year={2005},
+  doi={10.1016/j.ocemod.2004.08.002}
+}