Update single hap3 #18
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shajoezhu
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Mar 27, 2021
# This is the 1st commit message: Use c++17. # This is the commit message #2: Add headers log-double.hpp and logsum.hpp # This is the commit message #3: Use log_double_t for titre prior. # This is the commit message #4: Rename deltaLLKs to calcLikelihoodRatio and return log_double_t # This is the commit message #5: Convert calcLLK to calcSiteLikelihood returning log_double_t # This is the commit message #6: Add a product( ) function. # This is the commit message #7: Add templatized version of max_value( ) and min_value( ). # This is the commit message #8: Add adding of multiplying a vector by a constant. # This is the commit message #9: Simplify code to add constant to vector in buildEmission. # This is the commit message #10: Remove some asserts that are false during unit tests. # This is the commit message #11: Change vector<double> llk{0,1}_ to vector<log_double_t> siteLikelihoods{0,1}_ # This is the commit message #12: Convert McmcMachinery::currentLLks to vector<log_double_t>. Also rename it to currentSiteLikelihoods_. # This is the commit message #13: fixing code style check # This is the commit message #14: update, refixing the style # This is the commit message #15: Add headers log-double.hpp and logsum.hpp # This is the commit message #16: Use log_double_t for titre prior. # This is the commit message #17: Rename deltaLLKs to calcLikelihoodRatio and return log_double_t # This is the commit message #18: Convert calcLLK to calcSiteLikelihood returning log_double_t # This is the commit message #19: Add a product( ) function. # This is the commit message #20: Add templatized version of max_value( ) and min_value( ). # This is the commit message #21: Add adding of multiplying a vector by a constant.
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