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SCANS pre-release

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@Aurore-B Aurore-B released this 05 Sep 07:57
· 12 commits to main since this release
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Pre-release of SCANS v0.1.0

This release allows to:

  • perform synteny analysis of lncRNAs between species based on mRNA anchors (2 methods)
  • perform sequence alignment of lncRNAs and/or mRNAs between species
  • generate a global summary file on orthologous lncRNAs between species to compare results obtained by all methods
  • visualize one-to-one orthologous lncRNAs on upset plot determined by method or for pair species

Installation: see 'README'
This version has been tested on Genouest platform (Debian GNU/Linux 12)