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SCANS pre-release
Pre-release
Pre-release
Pre-release of SCANS v0.1.0
This release allows to:
- perform synteny analysis of lncRNAs between species based on mRNA anchors (2 methods)
- perform sequence alignment of lncRNAs and/or mRNAs between species
- generate a global summary file on orthologous lncRNAs between species to compare results obtained by all methods
- visualize one-to-one orthologous lncRNAs on upset plot determined by method or for pair species
Installation: see 'README'
This version has been tested on Genouest platform (Debian GNU/Linux 12)