6819 jdbc driver war

conf/docker-aio/testscripts/install

@@ -15,7 +15,6 @@ export SMTP_SERVER=localhost
 export MEM_HEAP_SIZE=2048
 export GLASSFISH_DOMAIN=domain1
 cd scripts/installer
-cp pgdriver/postgresql-42.2.12.jar $GLASSFISH_ROOT/glassfish/lib
 #cp ../../conf/jhove/jhove.conf $GLASSFISH_ROOT/glassfish/domains/$GLASSFISH_DOMAIN/config/jhove.conf
 cp /opt/dv/testdata/jhove.conf $GLASSFISH_ROOT/glassfish/domains/$GLASSFISH_DOMAIN/config/jhove.conf
 cp /opt/dv/testdata/jhoveConfig.xsd $GLASSFISH_ROOT/glassfish/domains/$GLASSFISH_DOMAIN/config/jhoveConfig.xsd

doc/sphinx-guides/source/developers/tips.rst

@@ -176,7 +176,6 @@ Switching from Glassfish to Payara
 If you already have a working dev environment with Glassfish and want to switch to Payara, you must do the following:
 
 - Copy the "domain1" directory from Glassfish to Payara.
-- Copy the PostgreSQL driver into place like this: ``cp scripts/installer/pgdriver/postgresql-42.*.jar /usr/local/payara5/glassfish/lib``
 
 ----
 

pom.xml

@@ -27,6 +27,7 @@
 
         <jakartaee-api.version>8.0.0</jakartaee-api.version>
         <payara.version>5.2020.6</payara.version>
+        <postgresql.version>42.2.18</postgresql.version>
         <aws.version>1.11.762</aws.version>
         <commons.logging.version>1.2</commons.logging.version>
         <httpcomponents.client.version>4.5.5</httpcomponents.client.version>
@@ -263,6 +264,11 @@
             <artifactId>jbcrypt</artifactId>
             <version>0.3m</version>
         </dependency>
+        <dependency>
+            <groupId>org.postgresql</groupId>
+            <artifactId>postgresql</artifactId>
+            <version>${postgresql.version}</version>
+        </dependency>
         <dependency>
             <groupId>org.flywaydb</groupId>
             <artifactId>flyway-core</artifactId>

scripts/database/homebrew/devinstall

@@ -15,6 +15,5 @@ export FILES_DIR=$HOME/dataverse/files
 export MEM_HEAP_SIZE=2048
 export GLASSFISH_DOMAIN=domain1
 export GLASSFISH_ROOT=/Applications/NetBeans/glassfish4
-cp pgdriver/postgresql-9.1-902.jdbc4.jar $GLASSFISH_ROOT/glassfish/lib
 cp ../../conf/jhove/jhove.conf $GLASSFISH_ROOT/glassfish/domains/$GLASSFISH_DOMAIN/config/jhove.conf
 ./glassfish-setup.sh

scripts/deploy/phoenix.dataverse.org/install

@@ -15,6 +15,5 @@ export SMTP_SERVER=localhost
 export MEM_HEAP_SIZE=2048
 export GLASSFISH_DOMAIN=domain1
 cd scripts/installer
-cp pgdriver/postgresql-8.4-703.jdbc4.jar $GLASSFISH_ROOT/glassfish/lib
 cp ../../conf/jhove/jhove.conf $GLASSFISH_ROOT/glassfish/domains/$GLASSFISH_DOMAIN/config/jhove.conf
 ./glassfish-setup.sh

scripts/installer/Makefile

@@ -1,7 +1,6 @@
 INSTALLER_ZIP_DIR=dvinstall
 DISTRIBUTION_WAR_FILE=${INSTALLER_ZIP_DIR}/dataverse.war
 GLASSFISH_SETUP_SCRIPT=${INSTALLER_ZIP_DIR}/as-setup.sh
-POSTGRES_DRIVERS=${INSTALLER_ZIP_DIR}/pgdriver
 API_SCRIPTS=${INSTALLER_ZIP_DIR}/setup-datasetfields.sh ${INSTALLER_ZIP_DIR}/setup-users.sh ${INSTALLER_ZIP_DIR}/setup-builtin-roles.sh ${INSTALLER_ZIP_DIR}/setup-dvs.sh ${INSTALLER_ZIP_DIR}/data ${INSTALLER_ZIP_DIR}/setup-identity-providers.sh  ${INSTALLER_ZIP_DIR}/setup-all.sh ${INSTALLER_ZIP_DIR}/post-install-api-block.sh
 JHOVE_CONFIG=${INSTALLER_ZIP_DIR}/jhove.conf
 JHOVE_SCHEMA=${INSTALLER_ZIP_DIR}/jhoveConfig.xsd
@@ -15,9 +14,9 @@ installer:	dvinstall.zip
 clean: 
 	/bin/rm -rf ${INSTALLER_ZIP_DIR} dvinstall.zip
 
-dvinstall.zip:	${GLASSFISH_SETUP_SCRIPT} ${POSTGRES_DRIVERS} ${JSF_PATCH_DIR} ${DISTRIBUTION_WAR_FILE} ${API_SCRIPTS} ${JHOVE_CONFIG} ${JHOVE_SCHEMA} ${SOLR_SCHEMA} ${SOLR_CONFIG} ${PYTHON_FILES} ${INSTALL_SCRIPT}
+dvinstall.zip:	${GLASSFISH_SETUP_SCRIPT} ${JSF_PATCH_DIR} ${DISTRIBUTION_WAR_FILE} ${API_SCRIPTS} ${JHOVE_CONFIG} ${JHOVE_SCHEMA} ${SOLR_SCHEMA} ${SOLR_CONFIG} ${PYTHON_FILES} ${INSTALL_SCRIPT}
 	@echo making installer...
-	zip -r dvinstall.zip ${GLASSFISH_SETUP_SCRIPT} ${POSTGRES_DRIVERS} ${JSF_PATCH_DIR} ${DISTRIBUTION_WAR_FILE} ${API_SCRIPTS} ${JHOVE_CONFIG} ${JHOVE_SCHEMA} ${SOLR_SCHEMA} ${SOLR_CONFIG} ${PYTHON_FILES} ${INSTALL_SCRIPT}
+	zip -r dvinstall.zip ${GLASSFISH_SETUP_SCRIPT} ${JSF_PATCH_DIR} ${DISTRIBUTION_WAR_FILE} ${API_SCRIPTS} ${JHOVE_CONFIG} ${JHOVE_SCHEMA} ${SOLR_SCHEMA} ${SOLR_CONFIG} ${PYTHON_FILES} ${INSTALL_SCRIPT}
 	@echo 
 	@echo "Done!"
 
@@ -45,11 +44,6 @@ ${GLASSFISH_SETUP_SCRIPT}:	as-setup.sh ${INSTALLER_ZIP_DIR}
 	@echo copying glassfish setup
 	/bin/cp as-setup.sh ${INSTALLER_ZIP_DIR}
 
-${POSTGRES_DRIVERS}:	 pgdriver/postgresql-42.2.12.jar
-	mkdir -p ${POSTGRES_DRIVERS}
-	@echo copying postgres driver
-	/bin/cp pgdriver/postgresql-42.2.12.jar ${POSTGRES_DRIVERS}
-
 ${API_SCRIPTS}:	../api/setup-datasetfields.sh ../api/setup-users.sh ../api/setup-dvs.sh ../api/setup-identity-providers.sh ../api/setup-all.sh ../api/post-install-api-block.sh ../api/setup-builtin-roles.sh ../api/data ${INSTALLER_ZIP_DIR}
 	@echo copying api scripts
 	/bin/cp -R ../api/setup-datasetfields.sh ../api/setup-users.sh ../api/setup-dvs.sh ../api/setup-identity-providers.sh ../api/setup-all.sh ../api/post-install-api-block.sh ../api/setup-builtin-roles.sh ../api/data ${INSTALLER_ZIP_DIR}

scripts/installer/README.txt

@@ -20,7 +20,6 @@ from scripts/installer (this directory):
 
 install
 glassfish-setup.sh
-pgdriver (the entire directory with all its contents)
 
 from scripts/api:
 

scripts/installer/install

@@ -840,19 +840,6 @@ sub setup_appserver {
 # with the MacOS glassfish build...). Verify, and if still the case,
 # add a check.
 
-    print "\nInstalling the PostgresQL driver for Payara5... ";
-#    system( "/bin/cp", "pgdriver/" . $postgres_jdbc, $glassfish_dir . "/glassfish/lib" );
-    my $pgdriver_success = copy("pgdriver/" . $postgres_jdbc, $glassfish_dir . "/glassfish/lib" );
-
-    unless ($pgdriver_success) 
-    {
-	print "\n*********************\n";
-	print "ERROR! Failed to copy the postgres driver into " . $glassfish_dir . "/glassfish/lib - check the directory permissions!\n";
-	exit 1;
-    }
-
-    print "done!\n";
-
     print "\n*********************\n";
     print "PLEASE NOTE, SOME OF THE ASADMIN COMMANDS ARE GOING TO FAIL,\n";
     print "FOR EXAMPLE, IF A CONFIGURATION SETTING THAT WE ARE TRYING\n";

scripts/installer/install.py

@@ -111,12 +111,6 @@
 # expected dataverse defaults
 apiUrl = "http://localhost:8080/api"
 
-# there's now a single driver that works for all supported versions:
-# jodbc.postgresql.org recommends 4.2 for Java 8.
-# updated drivers may be obtained from
-#  https://jdbc.postgresql.org/download.html
-pgJdbcDriver = "postgresql-42.2.12.jar"
-
 # 0. A few preliminary checks:                                                                                   
 # 0a. OS flavor:
 
@@ -441,15 +435,6 @@
 print("Setting App. Server heap size (Xmx) to "+str(gfHeap)+" Megabytes")
 config.set('glassfish','GLASSFISH_HEAP', str(gfHeap))
 
-# 4b1. PostgresQL driver:
-pg_driver_jarpath = "pgdriver/"+pgJdbcDriver
-
-try:
-   copy2(pg_driver_jarpath, gfJarPath)
-   print("Copied "+pgJdbcDriver+" into "+gfJarPath)
-except:
-   print("Couldn't copy "+pgJdbcDriver+" into "+gfJarPath+". Check its permissions?")
-
 # 4c. create payara admin credentials file
 
 userHomeDir = pwd.getpwuid(os.getuid())[5]