Assemblytics 2.0.1

Integrate Dot more fully in Assemblytics by consolidating duplicate steps.

Full Changelog: v2.0.0...v2.0.1

Assemblytics 2.0.0

Rewrite all code to Python (removing R and Perl), make the web app serverless using WebAssembly/Pyodide.
Integrate Dot into Assemblytics.

What's Changed

• Add example input .delta files by @MariaNattestad in #64
• Rewrite to python by @MariaNattestad in #65
• Update readme by @MariaNattestad in #66
• Add serverless WASM web app with interactive Dot plot integration by @MariaNattestad in #67
• Organize the README documentation better by @MariaNattestad in #69
• Add PyPI publish workflow by @MariaNattestad in #68

Full Changelog: 1.2.2...v2.0.0

Assemblytics 1.2.2

What's Changed

• Track examples in git repo by @MariaNattestad in #58
• Fix log file permissions to run pipeline in background by @MariaNattestad in #59
• Change Perl shebang to use env by @mschatz in #63

Full Changelog: 1.2.1...1.2.2

Assemblytics 1.2.1

Bug fix for issue #35.

Assemblytics 1.2

Now fully compatible with Python 3.

Assemblytics 1.1

• Consolidated the Assemblytics_web repo code into this repo, to enable all functionality in one place.
• Update python scripts to work with python 3, while maintaining compatibility to python 2.
• General code cleanup.
• Reorganized directories.
• Updated Readme.

Publication release

This is the version of Assemblytics as of publication and the version used to create the call set we contributed to Genome in a Bottle.