v0.18.1

What's Changed

• Fix ohi SDK READMEs (bad merge) by @Ostrzyciel in #397
• LNK-258: Make loading and linting a schema faster by @plokhotnyuk in #393
• LNK-258: Derive the slots of classes faster and with fewer copies by @plokhotnyuk in #396
• LNK-258: Make the Docs page of the playground fast on large schemas by @plokhotnyuk in #391
• Upgrade mill to 1.3 by @Ostrzyciel in #398
• Tidy up README and docs by @Ostrzyciel in #399
• LNK-258: Write the slot tables of class pages faster by @plokhotnyuk in #395
• LNK-258: Add the FIBO quickstart schema to the generator benchmarks by @plokhotnyuk in #394
• Regenerate metamodel by @niegrzybkowski in #406
• OHI-126: Fix search clutter by @rezafuru in #405

Full Changelog: v0.18.0...v0.18.1

v0.18.0

Rebranding

The LinkML-Scala repo is changing to ohi!

The LinkML-Scala engine is now just a part of the ohi project. LinkML-Scala is renamed to ohi LinkML.

Check out ohi.dev, ohi docs for more info about ohi.

Major features

New website

ohi LinkML has a new website now: linkml.ohi.dev, including docs, and a new look for the playground!

Documentation generator

Generates markdown documentation: an index of the schema plus a page for each class, slot, enum and type. This is also now the default generator in the playground.

Stats generator

Provides a quick summary of a LinkML schema, the number of classes, mappings, descriptions, and other basic checks.

Experimental functions metamodel feature

We're working on a new functions metamodel feature, which allows describing transformations between classes, like gRPC: Example

What's Changed

• OHI-91: Add an integration with ohi.dev in playground by @Ostrzyciel in #316
• LNK-233: Write a dict entry in the short form only when its other slots hold their defaults by @plokhotnyuk in #318
• Update jsonschema-circe to 0.12.1 by @scala-steward in #319
• LNK-245: Check URI and CURIE values when a schema is loaded and written by @plokhotnyuk in #313
• LNK-200: Add a docs site by @niegrzybkowski in #322
• Shorten command help texts, tidy them up by @Ostrzyciel in #320
• LNK-247: Add a Markdown documentation generator by @plokhotnyuk in #309
• OHI-93: Format search results in CLI output by @rezafuru in #326
• OHI-103: Add 👋ohi.dev docs by @niegrzybkowski in #327
• OHI-103: Fix node version by @niegrzybkowski in #329
• OHI-87: Add verified downloads from locks by @rezafuru in #314
• ohi LinkML: branding, theming, landing page by @Ostrzyciel in #331
• OHI-95: Better defaults for get/add by @rezafuru in #328
• Playground: make docs the default generator by @Ostrzyciel in #333
• Speed up CI by @Ostrzyciel in #332
• LNK-244: Support of min/max length in generators/importers by @plokhotnyuk in #335
• LNK-245: Fix problems found in review of URI and CURIE checks by @plokhotnyuk in #323
• OHI-94: Clarify CLI help and output by @rezafuru in #334
• Clean up stuff around website & docs by @Ostrzyciel in #337
• OHI-104: Infer default artifact format by @rezafuru in #338
• Shorter install.sh URL; direct people to ohi CLI by @Ostrzyciel in #343
• LNK-253: Fix OWL datatype imports by @niegrzybkowski in #339
• CLI: add Windows install scripts by @Ostrzyciel in #345
• Clean up Python stuff by @Ostrzyciel in #341
• Tidy up CONTRIBUTING.md by @Ostrzyciel in #349
• Rename ohi linkml 'generate' to 'to' by @Ostrzyciel in #348
• Preserve root types and enums in schema pruning mode by @Ostrzyciel in #340
• LNK-251: Warn if recommended slots are not present by @plokhotnyuk in #342
• LNK-195: Multilingual string support in generators by @plokhotnyuk in #336
• OHI-58 ohi SDKs: remove JSON Schema dependencies by @Ostrzyciel in #344
• Rename "LinkML-Scala" to "ohi LinkML" by @Ostrzyciel in #347
• LNK-254: add stats generator by @Ostrzyciel in #351
• OHI-96: Organize the documentation site by @rezafuru in #346
• LNK-256: Fix owl import by @plokhotnyuk in #354
• Implement the functional extension of LinkML by @Ostrzyciel in #357
• LinkML docs: use system theme by default by @Ostrzyciel in #356
• LinkML site: correct post-setup command by @Ostrzyciel in #359
• Speed up CI by @Ostrzyciel in #361
• ifabsent: extend support in Scala generator by @Ostrzyciel in #360
• Implement functions in TypeScript, Python, translation generators by @Ostrzyciel in #358
• Docs: add llms.txt, robots.txt, minor flair by @Ostrzyciel in #365
• ohi docs: recolor, change example by @Ostrzyciel in #368
• Slightly nicer ohi --help layout by @Ostrzyciel in #363
• Ensure consistent capitalization of "ohi" by @Ostrzyciel in #364
• ohi SDKs: add proper package readmes and metadata by @Ostrzyciel in #373
• Rename C header, dylib, Python module by @Ostrzyciel in #371
• LNK-188 Generate generator interfaces from LinkML schemas by @Ostrzyciel in #362
• LNK-188 Generate importer interfaces from LinkML schemas by @Ostrzyciel in #366
• Add doc pages for all generators and importers by @Ostrzyciel in #370
• Rename repo to NeverBlink-OSS/ohi by @Ostrzyciel in #372
• Reorganize LinkML playground files by @Ostrzyciel in #374
• OHI-112: Group versions in ohi.dev load dialog by @niegrzybkowski in #375
• OHI-116: Resolve ontology references in inspect by @rezafuru in #376
• LNK-100: implement any_of in JSON Schema, TS, Pydantic by @Ostrzyciel in #379
• LNK-259: Fix reading of block scalars with an indentation indicator by @plokhotnyuk in #380
• Add a CLA process by @Ostrzyciel in #381
• Adjust CLA config by @Ostrzyciel in #382
• OHI-88: Schema centralization by @niegrzybkowski in #383
• Point ohi.dev links at the new /o/ URL scheme by @Ostrzyciel in #377
• OHI-117: Make projects readable and manage ontology downloads by @rezafuru in #385
• OHI-117: Hide empty AI-agent guide by @rezafuru in #386
• Update case-app to 2.2.0 by @scala-steward in #387
• Update os-lib to 0.11.10 by @scala-steward in #388
• Patch updates by @scala-steward in #389
• LNK-110: Pruned schemas keep every class and enum they use, so they load without errors by @plokhotnyuk in #390
• LNK-102: Support type designators in the SHACL generator by @plokhotnyuk in #384

Full Changelog: v0.17.2...v0.18.0

v0.17.2

This release fixes a few bugs and greatly improves the performance of OWL generation on large LinkML schemas 🚀

What's Changed

• LNK-215: Add a stub value to empty enums in GraphQL by @plokhotnyuk in #306
• LNK-246: Move checked-in generated classes to their own Mill modules by @plokhotnyuk in #307
• Hash the Mill build files into the CI dependency cache key by @plokhotnyuk in #310
• UI: Move search into the dropdown by @niegrzybkowski in #311
• OHI-79: Extend SearchHit contract to include keywords as tags by @rezafuru in #308
• LNK-158, LNK-95: Expand CURIEs when data is read, compact URIs when it is written by @plokhotnyuk in #297
• LNK-214: Git lint fix by @niegrzybkowski in #312
• LNK-248: Add benchmarks for all single-document generators, and make the OWL generator faster by @plokhotnyuk in #315
• LNK-249: Revert Ossie to use alias by @niegrzybkowski in #317

Full Changelog: v0.17.1...v0.17.2

v0.17.1

Major features

👋 ohi.dev!

We're making a package manager for ontologies! A new CLI application for managing installations (+ LinkML-Scala as a subcommand) and lightweight SDKs for accessing ohi-managed ontologies in Scala (JVM), TS/JS and Python. The repo will also be renamed in the near future.
Learn more: cli/ohi/README.md, ohi/README.md

Import maps

Mechanism allowing translating well-known ontology URIs to files on disk, which makes re-using ontologies so much easier!
See more: docs/import_maps.md

What's Changed

• LNK-174: Keep the ^ pointer aligned in playground error reports by @plokhotnyuk in #283
• Update implementation differences for LinkML-Python 1.12 by @plokhotnyuk in #284
• Update the playground About dialog for recent changes by @plokhotnyuk in #285
• LNK-187: Derive LinkML codecs for classes with a type designator by @plokhotnyuk in #282
• Unmark Python bindings as "experimental" by @Ostrzyciel in #286
• LNK-177, LNK-129: Narrow any_of with slot_usage, support all boolean slots in SHACL by @plokhotnyuk in #270
• Misc fixes by @plokhotnyuk in #288
• Update apispec-model, jsonschema-circe to 0.12.0 by @scala-steward in #292
• Patch updates by @scala-steward in #293
• LNK-227: Fall back to another language for schema text by @plokhotnyuk in #290
• LNK-53 Add slot_usage and recursive inlining models to the model catalogue by @plokhotnyuk in #294
• Use GraalVM CE for distributed binaries by @Ostrzyciel in #296
• LNK-240: Add the Ohi client by @rezafuru in #298
• LNK-228: Import maps by @plokhotnyuk in #295
• Update to the LinkML metamodel where status is a string by @plokhotnyuk in #299
• Regenerate metamodel by @niegrzybkowski in #300
• Playground: add a ⇆ button to the RDFS generator by @Ostrzyciel in #302
• LNK-231: Add identifier, tree_root_as and library models to the model catalogue by @plokhotnyuk in #301
• OHI-80: Update pypi package references by @rezafuru in #305
• Improve fidelity of OWL and Ossie converters by @Ostrzyciel in #304

Full Changelog: v0.17.0...v0.17.1

v0.17.0

Major features

OWL 2 generators and importers

Highly configurable, round-trippable, tested with real ontologies. Works with RDFS as well. See it in action
Learn more: docs/owl.md

Typescript and Pydantic generators

Simple class generators following the structure of the JSON representation exactly, no linkml runtime needed.
Learn more: docs/pydantic.md docs/typescript.md

What's Changed

• Patch updates by @scala-steward in #250
• Update zio-blocks-schema-yaml to 0.0.54 by @scala-steward in #249
• Implement the TypeScript generator by @Ostrzyciel in #251
• LNK-171: Flatten only one-field classes marked with @flatten by @plokhotnyuk in #252
• LNK-220: Aliasing stability by @niegrzybkowski in #253
• LNK-101: Type designators for JsonSchema + code cleanup and performance improvements by @plokhotnyuk in #254
• Add a streaming Turtle parser by @Ostrzyciel in #255
• Upgrade Mac runners by @Ostrzyciel in #257
• LNK-226: Upgrade scala-yaml to 0.3.21 for YAML 1.2 document markers by @plokhotnyuk in #259
• OWL importer and generator by @Ostrzyciel in #256
• Hotfix playground not loading by @Ostrzyciel in #261
• Make sure RDFS imports work; bugfixes by @Ostrzyciel in #260
• LNK-136: Re-enable UriOrCurie value validation in MacroValidator by @plokhotnyuk in #263
• LNK-168: Reject unknown fields unless extra_slots allows them, in YAML codecs, JSON Schema, SHACL and TypeScript by @plokhotnyuk in #258
• LNK-219: Support union_of in Scala, JSON Schema, TypeScript and YAML codecs by @plokhotnyuk in #264
• LNK-154: Load a schema once when it is imported through different paths or links by @plokhotnyuk in #266
• Housekeeping, cleanup by @Ostrzyciel in #267
• Scala generator: add --clean option by @Ostrzyciel in #269
• Add the pydantic generator by @Ostrzyciel in #265
• Renaming and translation generator fixes by @nk2IsHere in #271
• Circe updates by @scala-steward in #273
• Update zio-blocks-schema-yaml to 0.0.56 by @scala-steward in #272
• Patch updates by @scala-steward in #274
• LNK-201: Treat .yaml and .yml in imports equally by @plokhotnyuk in #268
• LNK-122: Embed resources as readable text and generate ModelCatalogue entries by @plokhotnyuk in #275
• Agent skill: add OWL/RDFS and Ossie imports by @Ostrzyciel in #278
• Update mill to 1.3.0 by @Ostrzyciel in #279
• Regenerate re-ranked metamodel by @niegrzybkowski in #280
• LNK-141: Generate classes without children as single case classes by @plokhotnyuk in #276
• Revert "Update mill to 1.3.0 (#279)" by @niegrzybkowski in #281

New Contributors

• @nk2IsHere made their first contribution in #271

Full Changelog: v0.16.3...v0.17.0

v0.16.3

What's Changed

• Document the language string feature by @Ostrzyciel in #247
• Factor out rdf module, add N-Triples parser by @Ostrzyciel in #246
• Update to latest Ossie version, add IRI handling by @Ostrzyciel in #248

Full Changelog: v0.16.2...v0.16.3

v0.16.2

What's Changed

• Streamline READMEs by @Ostrzyciel in #243
• LNK-205: Scala conformance test runner by @niegrzybkowski in #236
• LNK-213: Add fuzzers for renaming round-trips by @niegrzybkowski in #240
• LNK-218: Split mill build scripts by @niegrzybkowski in #241
• Update jsoniter-scala-macros to 2.41.0 by @scala-steward in #244
• py: Fix unfreed Schemas hanging Python process on exit by @Ostrzyciel in #245

Full Changelog: v0.16.1...v0.16.2

v0.16.1

What's Changed

• RDF4J updates by @scala-steward in #232
• Add Ossie importer to playground; UI fixes by @Ostrzyciel in #234
• Fix Scala 3.9 keywords by @plokhotnyuk in #233
• LNK-208: Fix PV-alias in tests by @niegrzybkowski in #235
• LNK-34: Add opt-in JSON Schema null support by @rezafuru in #237
• LNK-206: ErDiagramGenerator into renaming framework by @rezafuru in #238
• LNK-126: implement type derivation by @rezafuru in #239

New Contributors

• @rezafuru made their first contribution in #237

Full Changelog: v0.16.0...v0.16.1

v0.16.0

Major features

• Generators and importers for Apache Ossie!
• The PyPI neverblink-linkml package now includes sdist, much smaller binaries, and works with essentially any platform.

What's Changed

• Add support for cardinality constraints in JSON Schema by @Ostrzyciel in #211
• LNK-167: Remove NMDC disables by @niegrzybkowski in #212
• LNK-166: Keep track of schema in issues by @niegrzybkowski in #213
• LNK-198: Factor sorting out to SchemaView by @niegrzybkowski in #214
• LNK-197: Multi-table catalogue tests by @niegrzybkowski in #215
• Update Scala to 3.9.0 LTS by @plokhotnyuk in #217
• LNK-183: Emit rdfs:subclassOf for enum is_a/mixin inheritance by @niegrzybkowski in #216
• Implement Scala Native bindings, sdist in Python package by @Ostrzyciel in #218
• Fix playground version footer by @Ostrzyciel in #220
• LNK-159: Strict renames by @niegrzybkowski in #219
• Enable LTO, fix target glibc version by @Ostrzyciel in #221
• Fix round-tripping and validating unique_keys by @Ostrzyciel in #223
• Fix round-tripping object-valued extensions by @Ostrzyciel in #224
• Update scala-yaml to 0.3.19 by @plokhotnyuk in #225
• Add an Apache Ossie generator by @Ostrzyciel in #222
• LNK-207: Fix non-standard separators in the metamodel by @niegrzybkowski in #226
• Playground: add a share button by @Ostrzyciel in #228
• LNK-212: Fix GraphQlRenamer not dodging leading digits by @niegrzybkowski in #227
• LNK-169: Add reserved Scala word escaping by @niegrzybkowski in #230
• Ossie importer by @Ostrzyciel in #229

Full Changelog: v0.15.1...v0.16.0

v0.15.1

What's Changed

• Update nativeimage, word to 25.3.4.1 by @scala-steward in #207
• Fix handling of escaped characters and line continuations in quoted YAML strings by @plokhotnyuk in #209

Full Changelog: v0.15.0...v0.15.1