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python3Packages.jax: towards fixing dependencies #297146

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merged 4 commits into from
Apr 2, 2024
Merged

python3Packages.jax: towards fixing dependencies #297146

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03cfe27
python311Packages.optax: 0.2.1 -> 0.2.2
GaetanLepage Apr 1, 2024
e80aaa9
python311Packages.flax: 0.8.1 -> 0.8.2
GaetanLepage Apr 1, 2024
39db04b
python311Packages.equinox: fix build by disabling failing test
GaetanLepage Apr 1, 2024
fb7f0da
python311Packages.distrax: mark as broken
GaetanLepage Apr 1, 2024
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3 changes: 3 additions & 0 deletions pkgs/development/python-modules/distrax/default.nix
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Original file line number Diff line number Diff line change
Expand Up @@ -82,5 +82,8 @@ buildPythonPackage rec {
homepage = "https://github.com/deepmind/distrax";
license = licenses.asl20;
maintainers = with maintainers; [ onny ];
# Several tests fail with:
# AssertionError: [Chex] Assertion assert_type failed: Error in type compatibility check
broken = true;
};
}
5 changes: 5 additions & 0 deletions pkgs/development/python-modules/equinox/default.nix
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Expand Up @@ -47,6 +47,11 @@ buildPythonPackage rec {

pythonImportsCheck = [ "equinox" ];

disabledTests = [
# Failed: DID NOT WARN. No warnings of type (<class 'UserWarning'>,) were emitted.
"test_tracetime"
];

meta = with lib; {
description = "A JAX library based around a simple idea: represent parameterised functions (such as neural networks) as PyTrees";
changelog = "https://github.com/patrick-kidger/equinox/releases/tag/v${version}";
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7 changes: 4 additions & 3 deletions pkgs/development/python-modules/flax/default.nix
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Expand Up @@ -25,16 +25,16 @@

buildPythonPackage rec {
pname = "flax";
version = "0.8.1";
version = "0.8.2";
pyproject = true;

disabled = pythonOlder "3.8";
disabled = pythonOlder "3.9";

src = fetchFromGitHub {
owner = "google";
repo = "flax";
rev = "refs/tags/v${version}";
hash = "sha256-3UzMSJoKw+V1WLBJ+Zf7aF7CDNBsvWnRUfNgb3K4v1A=";
hash = "sha256-UABgJGe1grUSkwOJpjeIoFqhXsqG//HlC1YyYPxXV+g=";
};

nativeBuildInputs = [
Expand Down Expand Up @@ -87,6 +87,7 @@ buildPythonPackage rec {
# `tensorflow_datasets`, `vocabulary`) so the benefits of trying to run them
# would be limited anyway.
"examples/*"
"flax/experimental/nnx/examples/*"
# See https://github.com/google/flax/issues/3232.
"tests/jax_utils_test.py"
# Requires tree
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15 changes: 10 additions & 5 deletions pkgs/development/python-modules/optax/default.nix
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Original file line number Diff line number Diff line change
@@ -1,6 +1,7 @@
{ lib
, absl-py
, buildPythonPackage
, flit-core
, chex
, fetchFromGitHub
, jaxlib
Expand All @@ -11,23 +12,27 @@

buildPythonPackage rec {
pname = "optax";
version = "0.2.1";
format = "setuptools";
version = "0.2.2";
pyproject = true;

disabled = pythonOlder "3.7";
disabled = pythonOlder "3.9";

src = fetchFromGitHub {
owner = "deepmind";
repo = pname;
repo = "optax";
rev = "refs/tags/v${version}";
hash = "sha256-vimsVZV5Z11euLxsu998pMQZ0hG3xl96D3h9iONtl/E=";
hash = "sha256-sBiKUuQR89mttc9Njrh1aeUJOYdlcF7Nlj3/+Y7OMb4=";
};

outputs = [
"out"
"testsout"
];

nativeBuildInputs = [
flit-core
];

buildInputs = [
jaxlib
];
Expand Down