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This program is made to help you converting RNA to DNA | DNA to RNA in a fastq file.
You can easily install this package using PyPI
$ pip install convertFQ
Download the latest realese of convertFQ in my Github repository.
Then install it using pip
$ pip install convertFQ-0.1.0.tar.gz
Converting U (uracil) with T (thymine)
$ convertFQ -i INPUT.fastq -c "rna2dna" -o OUTPUT
Converting T (thymine) with U (uracil)
$ convertFQ -i INPUT.fastq -c "dna2rna" -o OUTPUT
$ convertFQ --help
usage: convertFQ [-h] [-v] -i INPUT -c CONVERSION -o OUTPUT
convertFQ: RNA -> DNA | DNA -> RNA
optional arguments:
-h, --help show this help message and exit
-v, --version Print version and exit.
-i INPUT, --input INPUT
Input FASTQ [Required]
-c CONVERSION, --conversion CONVERSION
rna2dna | dna2rna [Required]
-o OUTPUT, --output OUTPUT
output name [Required]
If you find this package useful, please cite (https://github.com/NuruddinKhoiry/convertFQ)