When the format function changes omics data to wide, having entrez_ids as column names and improve_sample_id as rows is a bit more standard. This should be a one-line change using .transpose(). Example: Before: <img width="993" alt="Image" src="https://github.com/user-attachments/assets/19687a71-fc81-44e8-ae82-9405663ad5ef" /> After: <img width="990" alt="Image" src="https://github.com/user-attachments/assets/c32e5207-cbde-46b1-b29d-4f76aa486980" />