Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[ADD] Add pi0estimation extended error help into separate PR from PR … #103

Merged
merged 1 commit into from
Mar 25, 2022

Conversation

singjc
Copy link
Contributor

@singjc singjc commented Mar 24, 2022

Separate pi0 estimation extended error help into separate PR from PR #101

Report and Message when pi0 Estimation fails

I extended the error messaged when the estimated pi0 <= 0, to show what the current lambda values were used. I also included a report pdf of the pvalue histogram used in the pi0 estimation, to give the user a better idea of why it may have failed.

Error: The estimated pi0 <= 0. Check that you have valid p-values or use a different range of lambda. Current lambda: [0.1 0.15 0.2 0.25 0.3 0.35 0.4 0.45 0.5 0.55 0.6 0.65 0.7 0.75
0.8 0.85 0.9 0.95]

Example

image

@grosenberger grosenberger merged commit 350b316 into PyProphet:master Mar 25, 2022
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants