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@QTIM-Lab

QTIM Lab

The Quantitative Translational Imaging in Medicine Lab at the Martinos Center (MGH/HST)

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  1. DeepNeuro DeepNeuro Public

    A deep learning python package for neuroimaging data. Made by:

    Jupyter Notebook 121 36

  2. qtim_Tutorials qtim_Tutorials Public

    Jupyter notebooks and other tutorials for medical imaging and deep learning, courtesy of the QTIM lab.

    Jupyter Notebook 28 15

  3. SiameseChange SiameseChange Public

    Python 17 5

  4. qtim_ROP qtim_ROP Public

    Code base for preprocessing, segmentation and classification of retinal images

    Python 14 8

  5. qtim_tools qtim_tools Public

    A set of tools used for quantitative analysis of and machine learning from 3D medical images. Created by the Quantitative Tumor Imaging Lab at Martinos.

    HTML 11 5

  6. Assessing-Saliency-Maps Assessing-Saliency-Maps Public

    Python 10 2

Repositories

Showing 10 of 97 repositories
  • QTIM-Lab/FL_ViT_pretraining’s past year of commit activity
    Python 1 0 0 0 Updated Jun 30, 2024
  • codabench Public Forked from codalab/codabench

    Codabench is a flexible, easy-to-use and reproducible benchmarking platform. Check our paper at Patterns Cell Press https://hubs.li/Q01fwRWB0

    QTIM-Lab/codabench’s past year of commit activity
    Python 0 Apache-2.0 27 0 0 Updated Jun 17, 2024
  • dinov2_imagenet1k_example Public

    To get DinoV2 running on a non-slurm environment on ImageNet 1K

    QTIM-Lab/dinov2_imagenet1k_example’s past year of commit activity
    Python 3 1 0 0 Updated Jun 15, 2024
  • federatedLearning_glaucoma_segmentation Public

    Federated Learning Optic Disc and Cup Segmentation Model for Glaucoma Monitoring in Color Fundus Photographs(CFPs)

    QTIM-Lab/federatedLearning_glaucoma_segmentation’s past year of commit activity
    Python 1 0 0 0 Updated May 25, 2024
  • OPTIMEyes Public

    Updated Image Comparator and Classifier

    QTIM-Lab/OPTIMEyes’s past year of commit activity
    Jupyter Notebook 0 0 2 0 Updated May 14, 2024
  • EyeLiner Public Forked from cvg/LightGlue

    Automatic Longitudinal Image Registration using Fundus Landmarks (ARVO 2024)

    QTIM-Lab/EyeLiner’s past year of commit activity
    Python 0 Apache-2.0 318 0 0 Updated May 12, 2024
  • QTIM-Lab/RSNA-Pneumonia-Challenge-Models’s past year of commit activity
    Python 0 0 0 1 Updated May 3, 2024
  • dl-prediction-brca-tiph Public

    Implementation of the paper "Deep Learning-based Prediction of Breast Cancer Tumor and Immune Phenotypes from Histopathology" by Tiago Gonçalves, Dagoberto Pulido-Arias, Julian Willett, Katharina V. Hoebel, Mason Cleveland, Syed Rakin Ahmed, Elizabeth Gerstner, Jayashree Kalpathy-Cramer, Jaime S. Cardoso, Christopher P. Bridge and Albert E. Kim.

    QTIM-Lab/dl-prediction-brca-tiph’s past year of commit activity
    Python 3 MIT 0 0 0 Updated May 3, 2024
  • trame_optimeyes Public

    trame tools and visualizations

    QTIM-Lab/trame_optimeyes’s past year of commit activity
    Python 2 1 1 1 Updated Apr 30, 2024
  • OptimEYES-Anaylsis Public

    For pulling and analyzing data from the Image-Comparator app.

    QTIM-Lab/OptimEYES-Anaylsis’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Apr 29, 2024

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