Bioplanner

Forked Repo for BioPlanner With some Replication and some stats in the folder: Automatic Evaluation of LLMs on Protocol Planning in Biology https://arxiv.org/abs/2310.10632

Prerequisites

• Conda (https://conda.io/projects/conda/en/latest/user-guide/install/macos.html#install-macos-silent)

Install steps

conda env create -f environment.yml conda activate bioplanner poetry install

Evaluation

To run an Evaluation, add a correctly filled out json file to the to_evaluate folder then run python src/run_evaluate.py. The results of the evaluation will be in a json file results.json