Skip to content

roottrait 1.0.0

Latest

Choose a tag to compare

@SamirHossain099 SamirHossain099 released this 02 Oct 01:47
· 1 commit to main since this release

First release.

The library (src/roottrait): twelve root traits from binary masks grouped by how pixel error enters them, six named segmentation failures with per-mask calibration to an exact Dice loss, a four-kind pixel error decomposition, pinhole filling for annotations, skeleton pruning, and four synthetic root architectures.

The repository also holds the analysis scripts and results files behind every number in the manuscript "Dice overlap as a proxy for root trait error in image segmentation", including calibrated failures on 96 PRMI annotations at native resolution and the per-frame Dice of 36 trained segmentation models.