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@Sparktx-Data-Science

SparkDS

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  1. demultiplex demultiplex Public

    Forked from nf-core/demultiplex

    Demultiplexing pipeline for sequencing data

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  2. scrnaseq scrnaseq Public

    Forked from nf-core/scrnaseq

    A single-cell RNAseq pipeline for 10X genomics data

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  3. rnaseq rnaseq Public

    Forked from nf-core/rnaseq

    RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

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  4. differentialabundance differentialabundance Public

    Forked from nf-core/differentialabundance

    Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq

    Nextflow

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