Error while running dockerized SpykingCircus #895
Description
sorting = ss.run_spykingcircus(recording=recording,
output_folder=f"/hdd/kampff/raw/Recordings/{dataset_id}/spykingcircus",
docker_image=True,
**sorter_params)
returns
Traceback (most recent call last):
File "/home/kyu/miniconda3/envs/di_val/lib/python3.9/site-packages/spikeinterface/sorters/runsorter.py", line 564, in run_sorter_container
sorting = SorterClass.get_result_from_folder(output_folder)
File "/home/kyu/miniconda3/envs/di_val/lib/python3.9/site-packages/spikeinterface/sorters/basesorter.py", line 281, in get_result_from_folder
sorting = cls._get_result_from_folder(output_folder)
File "/home/kyu/miniconda3/envs/di_val/lib/python3.9/site-packages/spikeinterface/sorters/spyking_circus/spyking_circus.py", line 169, in _get_result_from_folder
sorting = SpykingCircusSortingExtractor(folder_path=Path(output_folder) / 'recording')
File "/home/kyu/miniconda3/envs/di_val/lib/python3.9/site-packages/spikeinterface/extractors/spykingcircusextractors.py", line 67, in __init__
raise Exception(spykingcircus_folder, " is not a spyking circus folder")
Exception: (PosixPath('/hdd/kampff/raw/Recordings/c27/spykingcircus/recording'), ' is not a spyking circus folder')
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/kyu/repos/deepinterpolation_validation/processing/sort_di_sc.py", line 52, in <module>
main()
File "/home/kyu/repos/deepinterpolation_validation/processing/sort_di_sc.py", line 30, in main
sorting = ss.run_spykingcircus(recording=recording,
File "/home/kyu/miniconda3/envs/di_val/lib/python3.9/site-packages/spikeinterface/sorters/runsorter.py", line 679, in run_spykingcircus
return run_sorter('spykingcircus', *args, **kwargs)
File "/home/kyu/miniconda3/envs/di_val/lib/python3.9/site-packages/spikeinterface/sorters/runsorter.py", line 135, in run_sorter
return run_sorter_container(
File "/home/kyu/miniconda3/envs/di_val/lib/python3.9/site-packages/spikeinterface/sorters/runsorter.py", line 571, in run_sorter_container
sorting = NpzSortingExtractor.load_from_folder(npz_sorting_path)
File "/home/kyu/miniconda3/envs/di_val/lib/python3.9/site-packages/spikeinterface/core/base.py", line 565, in load_from_folder
return BaseExtractor.load(folder)
File "/home/kyu/miniconda3/envs/di_val/lib/python3.9/site-packages/spikeinterface/core/base.py", line 561, in load
raise ValueError('spikeinterface.Base.load() file_path must be an existing folder or file')
ValueError: spikeinterface.Base.load() file_path must be an existing folder or file