Turaga Lab

Repositories

• DECODE
  Python GPL-3.0 0 0 1 0 Updated Sep 28, 2020

• SplinePSF
  Cuda GPL-3.0 0 0 1 0 Updated Sep 24, 2020

• gunpowder

  Forked from funkey/gunpowder

  Data loading DAG for Greentea.
  Python 36 0 0 1 Updated Jul 15, 2020

• vae

  Model-agnostic variational autoencoder tools

  machine-learning variational-inference variational-autoencoder
  Python MIT 0 1 0 0 Updated Apr 12, 2020

• malis

  MALIS structured loss function for supervised learning of segmentation and clustering
  Python 10 10 3 0 Updated Jan 31, 2020

• MSRI2018_PupilCodedMicroscope

  MSRI 2018 summer school (Group 7)
  Jupyter Notebook 0 0 0 0 Updated Jul 5, 2018

• slurm_cluster

  Configuration files, scripts, and howtos for using the slurm cluster.
  Python 0 2 0 0 Updated Apr 19, 2018

• gunpowder_examples

  Example scripts for gunpowder training and prediction.
  Python 0 0 0 0 Updated Aug 28, 2017

• system_setup

  Scripts and docs describing system configuration.
  Makefile 0 0 0 0 Updated Aug 4, 2017

• syntist_progress_report

  Show progress and current results in syntist project
  Jupyter Notebook 0 0 0 0 Updated Jul 18, 2017

• flyem-dockerfiles

  Forked from janelia-flyem/flyem-dockerfiles

  Docker Files for Fly EM Software
  4 0 0 0 Updated Jul 12, 2017

• nyroglancer

  Forked from funkey/nyroglancer

  jupyter notebook extension to visualize numpy arrays with the neuroglancer
  Python Apache-2.0 10 2 0 0 Updated Jun 30, 2017

• ipp-tools

  Collection of IPyParallel tools and helper scripts
  Python MIT 0 0 0 0 Updated Jun 29, 2017

• dvision

  Python client for the DVID database
  Python 0 0 0 0 Updated Jun 29, 2017

• greentea-docker
  Shell 1 0 0 0 Updated May 10, 2017

• PyGreentea

  Forked from naibaf7/PyGreentea
  Python BSD-2-Clause 9 0 1 0 Updated May 4, 2017

• greentea_training_template
  Python 0 0 0 0 Updated May 1, 2017

• DVIDSparkServices

  Forked from janelia-flyem/DVIDSparkServices

  Spark implemented EM reconstruction software workflows
  Python 1 0 0 0 Updated Mar 15, 2017

• optoConn

  Active causal connectivity inference
  Python 1 0 0 0 Updated Oct 13, 2016

• caffe-janelia
  Jupyter Notebook 2 0 2 0 Updated Jun 27, 2016

• spark-janelia

  Forked from freeman-lab/spark-janelia

  Scripts for using Spark on Janelia's HPC
  Jupyter Notebook 16 0 0 0 Updated May 16, 2016

• pygt_models
  Jupyter Notebook 1 0 0 0 Updated Jan 20, 2016