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Run a Single Fit
valor-run_fit \
--config /sbnd/app/users/bslater/valor/VALOR-SBN/config/analysis/sbn_nue_prism_1_2020a1_1_universes_sbndonly_stat.xml \
--physics-hypothesis eff_sterile_osc \
--param-values-option prefit-errors \
--osc-prior-file priors/void_priors.xml \
--load-prior-from-file - \
--fitter minuit+with_simplex_fallback \
--mesg-thresholds verbosity.xml \
--without-stat-fluct \
--tag sbn_toy \
--run 1 \
--ntoymc 1 \
--input-dm41sq 0. \
--fix-at-dm41sq 0.01 \
--fix-dm41sq \
--input-sinsq2thMuMu 0. \
--fix-at-sinsq2thMuMu 0. \
--fix-sinsq2thMuMu \
--input-sinsq2thMuE 0. \
--fix-at-sinsq2thMuE 0.00001 \
--fix-sinsq2thMuE \
--input-sinsq2thEE 0. \
--fix-at-sinsq2thEE 0. \
Using app VALOR-SDK/src/valor/Apps/run_fit.cxx
See https://github.com/VALOR-fit/VALOR-SBN/wiki/Produce-oscillation-sensitivity-plots for for running many fits on the grid
--config: see below
--physics-hypothesis: oscillations (eff_sterile_osc) or not (void)
--tag: output file
--input-dm41sq, --fix-at-dm41sq, and --fix-dm41sq (and similar for other params): start value for fit, fit keeps value fixed at this value, and bool to tell fit to fix the value respectively.
--read-data: include if giving data in config/analysis file (default is generate)
Find argument options in .arg files, these are located in VALOR_SDK/config/apps/*.arg
Line 105 of run_fit.cxx:
arg.Read(argc,argv,"$VALOR_FMWK/config/apps/run_fit.arg:$VALOR_FMWK/config/apps/seeds.arg:$VALOR_FMWK/config/apps/oscparams.arg");
There are 3 argument lists included here, run_fit.arg, seeds.arg, and oscparams.arg. Look at those for all options (or edit/add a new list to expand)
Load in --config argument
Each element is a different sample (eg different detector or PRISM bin)
Within each element there is:
- General setup: detector name, beam name, chosen observable (Ereco), data and model classes (GSSFD and GSSFM in
VALOR-SDK/src/valor/FitElements), and binning. - An associated
config/mcfile that points to the beam configuration, detector configuration, MC templates (dsts), modelist, binning (match toanalysis/config), and splines (if including systematics). -
When including data/mock data An associated
config/datafile that includes binning and the data dsts (and a bool to see what format data is in, currently will always be true for<using_dst_format>).- Currently updating GSSFD to include histograms (TH1Ds)/VALORArrays as input instead of just dsts, currently at testing stage.
VALOR-SBN/config/analysis/sbn_numu_disapp_2020a1_1.xml for stat only
VALOR-SBN/config/analysis/sbn_numu_disapp_2020a1_03d1_1.xml for stat+syst
Contains:
- Names in different formats
- Range the parameter is applied to (which part of Ereco spectrum)
- Type (response, normalisation, ...) and Catagories (flux, interaction, modern, ...)
- What configurations to apply to
- Allowed variation away from nominal (in sigma)
VALOR-SBN/config/params/sbn_pot_normalisation.xml
or
VALOR-SBN/config/params/sbn_interaction_parameters.xml
Different groups for each parameter matrix
VALOR-SBN/config/parameter_matrices/SBNFluxResponseParams.xml
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