ARROW-7752: [Release] Enable and test dataset in the verification script #6346
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xhochy
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We're not testing the dataset feature in the verifications scripts yet. Closes #6346 from kszucs/dataset-verification and squashes the following commits: b8530ea <Krisztián Szűcs> Test dataset during the verification Authored-by: Krisztián Szűcs <szucs.krisztian@gmail.com> Signed-off-by: Sutou Kouhei <kou@clear-code.com>
wesm
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Feb 21, 2020
commit 9eecaaf Author: Omega Gamage <omega@bigstream.co> Date: Tue Feb 18 14:23:08 2020 +0530 used std::map instead of std::unordered_map to store num_data_pages commit 6822fc6 Author: Omega Gamage <omega@bigstream.co> Date: Mon Feb 17 11:45:03 2020 +0530 remove default arguments for page number counts in ColumnChunkMetaDataBuilder::Finish commit 49e1861 Author: Omega Gamage <omega@bigstream.co> Date: Fri Feb 14 16:22:41 2020 +0530 Added the class PageEncodingStats to types.h commit 9dc5b6b Merge: 9b776f3 d65a71a Author: Omega Gamage <omega@bigstream.co> Date: Wed Feb 12 12:25:50 2020 +0530 resolved merge conflicts commit 9b776f3 Author: Omega Gamage <omega@bigstream.co> Date: Thu Feb 6 16:12:31 2020 +0530 PARQUET-1780: [C++] Set ColumnMetadata.encoding_stats field Fixed lint errors Use std::map to store datapage count Added unit test to test encoding_stats commit d65a71a Author: Omega Gamage <omega@bigstream.co> Date: Thu Feb 6 20:11:09 2020 +0530 Fixed lint errors commit 053ce4d Author: Omega Gamage <omega@bigstream.co> Date: Thu Feb 6 16:12:31 2020 +0530 PARQUET-1780: [C++] Set ColumnMetadata.encoding_stats field commit f68f0d2 Author: Antoine Pitrou <antoine@python.org> Date: Thu Feb 6 12:27:47 2020 +0900 ARROW-7524: [C++][CI] Enable Parquet in the VS2019 GHA job [skip appveyor] Closes apache#6359 from pitrou/ARROW-7524-gha-win-parquet and squashes the following commits: 73fea4c <Antoine Pitrou> ARROW-7524: Enable Parquet in the VS2019 GHA job Authored-by: Antoine Pitrou <antoine@python.org> Signed-off-by: Sutou Kouhei <kou@clear-code.com> commit 834ce15 Author: tianchen <niki.lj@alibaba-inc.com> Date: Wed Feb 5 16:39:31 2020 -0800 ARROW-7467: [Java] ComplexCopier does incorrect copy for Map nullable info Related to [ARROW-7467](https://issues.apache.org/jira/browse/ARROW-7467). The MapVector and its 'value' vector are nullable, and its structVector and 'key' vector are non-nullable. However, the MapVector generated by ComplexCopier has all nullable fields which is not correct. Closes apache#6094 from tianchen92/ARROW-7467 and squashes the following commits: 7606a78 <tianchen> use UnionMapWriter API 2b68466 <tianchen> remove useless code in struct case 7cbd9bb <tianchen> resolve comments e38e180 <tianchen> fix test e058842 <tianchen> ARROW-7467: ComplexCopier does incorrect copy for Map nullable info Authored-by: tianchen <niki.lj@alibaba-inc.com> Signed-off-by: Bryan Cutler <cutlerb@gmail.com> commit 8a13c02 Author: tianchen <niki.lj@alibaba-inc.com> Date: Wed Feb 5 16:29:50 2020 -0800 ARROW-7405: [Java] ListVector isEmpty API is incorrect Related to [ARROW-7405](https://issues.apache.org/jira/browse/ARROW-7405). Currently isEmpty API is always return false in BaseRepeatedValueVector, and its subclass ListVector did not overwrite this method. This will lead to incorrect result, for example, a ListVector with data [1,2], null, [], [5,6] should get [false, false, true, false] with this API, but now it would return [false, false, false, false]. This change implements `isEmpty(int index)` for a `ListVector` that will return `true` if the index is an empty list or a null value, and `false` otherwise. Closes apache#6044 from tianchen92/ARROW-7405 and squashes the following commits: 797f9b7 <tianchen> fix style and comments bbe35db <tianchen> treat null as empty 41e0ed5 <tianchen> resolve some comments 12810e4 <tianchen> ARROW-7405: ListVector isEmpty API is incorrect Authored-by: tianchen <niki.lj@alibaba-inc.com> Signed-off-by: Bryan Cutler <cutlerb@gmail.com> commit a1ba1cb Author: Takashi Hashida <t-hashida@amiya.co.jp> Date: Wed Feb 5 12:10:31 2020 -0600 ARROW-7514: [C#] Make GetValueOffset Obsolete * Add an [Obsolete] attribute to `BinaryArray.GetValueOffset` * `ListArray.GetValueOffset` already has the [Obsolete] attribute, so it is not changed * Avoid using `GetValueOffset` in the product source code As a precaution, I added tests for `ValueOffsets` and left tests for `GetValueOffset`. Closes apache#6333 from HashidaTKS/ARROW-7514_make_getvalueoffset_obsolete and squashes the following commits: 1dbaf39 <Takashi Hashida> ARROW-7514_make_getvalueoffset_obsolete 92b14c0 <Takashi Hashida> ARROW-7514_make_getvalueoffset_obsolete 07d106c <Takashi Hashida> ARROW-7514_make_getvalueoffset_obsolete Authored-by: Takashi Hashida <t-hashida@amiya.co.jp> Signed-off-by: Eric Erhardt <eric.erhardt@microsoft.com> commit c02d376 Author: Rok <rok@mihevc.org> Date: Wed Feb 5 15:45:32 2020 +0100 ARROW-4226: [C++] Add sparse CSF tensor support This is to resolve [ARROW-4226](https://issues.apache.org/jira/browse/ARROW-4226). Closes apache#5716 from rok/ARROW-4226 and squashes the following commits: 9ca93ab <Rok> Implementing review feedback. 1b922f6 <Rok> Implementing review feedback. 11b81bb <Rok> Factoring out index incrementing for dense to COO and CSF indices. 6f4f4a8 <Rok> Implementing feedback review. 28d38cb <Rok> Removing backslashes from comments. 3291abc <Rok> Marking indptrBuffers, indicesBuffers and axisOrder required. d9ff47e <Rok> Further work and implementing review feedback. 24a831f <Rok> Style. 4f2bf00 <Rok> Work on CSF index tests. 6ceb406 <Rok> Implementing review feedback. bd0d8c2 <Rok> Dense to sparse CSF conversion now in order of dimension size. eb51947 <Rok> Switching SparseCSFIndex to '2D' data structure. a322ff5 <Rok> Adding tests for multiple index value types for SparseCSFIndex. f44d92c <Rok> Adding SparseCSFIndex::Make. 7d17995 <Rok> Adding Tensor to SparseCSFTensor conversion. 05a47a5 <Rok> Using axis_order in CSF. 6b938f7 <Rok> Documentation. 2d10104 <Rok> WIP Authored-by: Rok <rok@mihevc.org> Signed-off-by: Antoine Pitrou <antoine@python.org> commit 25fd97b Author: Martin Radev <martin.b.radev@gmail.com> Date: Tue Feb 4 19:10:53 2020 -0600 PARQUET-1716: [C++] Add BYTE_STREAM_SPLIT encoder and decoder The patch implements an encoder and decoder for Parquet's BYTE_STREAM_SPLIT encoding. The patch also adds tests for the new encoding. Closes apache#6005 from martinradev/byte_stream_split_submit and squashes the following commits: 5a78f8b <Martin Radev> ARROW-5913: Add BYTE_STREAM_SPLIT encoder and decoder Authored-by: Martin Radev <martin.b.radev@gmail.com> Signed-off-by: Wes McKinney <wesm+git@apache.org> commit 184f828 Author: Joris Van den Bossche <jorisvandenbossche@gmail.com> Date: Tue Feb 4 18:58:37 2020 -0600 ARROW-7762: [Python] Do not ignore exception for invalid version in ParquetWriter Closes apache#6352 from jorisvandenbossche/ARROW-7762 and squashes the following commits: 9353658 <Joris Van den Bossche> ARROW-7762: Do not ignore exception for invalid version in ParquetWriter Authored-by: Joris Van den Bossche <jorisvandenbossche@gmail.com> Signed-off-by: Wes McKinney <wesm+git@apache.org> commit 67e34c5 Author: Neal Richardson <neal.p.richardson@gmail.com> Date: Tue Feb 4 18:57:12 2020 -0600 ARROW-7766: [Python][Packaging] Windows py38 wheels are built with wrong ABI tag This is fixed in the latest release of `wheel` but we were pinning to an old version Closes apache#6353 from nealrichardson/fix-win-38-wheels and squashes the following commits: e3a865b <Neal Richardson> Remove wheel pin in requirements-wheel.txt Authored-by: Neal Richardson <neal.p.richardson@gmail.com> Signed-off-by: Wes McKinney <wesm+git@apache.org> commit 992d9fc Author: Krisztián Szűcs <szucs.krisztian@gmail.com> Date: Wed Feb 5 06:42:37 2020 +0900 ARROW-7752: [Release] Enable and test dataset in the verification script We're not testing the dataset feature in the verifications scripts yet. Closes apache#6346 from kszucs/dataset-verification and squashes the following commits: b8530ea <Krisztián Szűcs> Test dataset during the verification Authored-by: Krisztián Szűcs <szucs.krisztian@gmail.com> Signed-off-by: Sutou Kouhei <kou@clear-code.com> commit b7dbbcc Author: Wes McKinney <wesm+git@apache.org> Date: Tue Feb 4 12:35:14 2020 -0600 ARROW-6757: [Release] Use same CMake generator for C++ and Python when verifying RC, remove Python 3.5 from wheel verification This resolves the issues I was having as described in ARROW-6757. This does not fix the Python 3.8 wheel, though Closes apache#6350 from wesm/windows-rc-verify-fixes and squashes the following commits: a9d4c66 <Wes McKinney> Fixes for Windows release verification scripts Authored-by: Wes McKinney <wesm+git@apache.org> Signed-off-by: Wes McKinney <wesm+git@apache.org> commit 09059d5 Author: Wes McKinney <wesm+git@apache.org> Date: Tue Feb 4 12:02:29 2020 -0600 ARROW-7760: [Release] Fix verify-release-candidate.sh since pip3 seems to no longer be in miniconda, install miniconda unconditionally This change was necessary for me to get the script to finish to completion. Closes apache#6348 from wesm/pip3-to-pip and squashes the following commits: fcf3ae6 <Wes McKinney> conda environment must be activated for other steps to work if C++ is disabled. Fix selective disabling of integration test components in archery 26da759 <Krisztián Szűcs> always set up miniconda 490ceac <Wes McKinney> pip3 no longer in miniconda Lead-authored-by: Wes McKinney <wesm+git@apache.org> Co-authored-by: Krisztián Szűcs <szucs.krisztian@gmail.com> Signed-off-by: Wes McKinney <wesm+git@apache.org> commit d6b6f87 Author: Antoine Pitrou <antoine@python.org> Date: Tue Feb 4 15:41:19 2020 +0100 ARROW-7691: [C++] Check non-scalar Flatbuffers fields are not null We're discussing whether to make those fields required in the schema definitions (which would make validation automatic by the flatbuffers generated verifier), but in the meantime we can check those fields manually. This should fix a bunch of issues detected by OSS-Fuzz. Closes apache#6293 from pitrou/ARROW-7691-check-fb-fields-not-null and squashes the following commits: 02478a6 <Antoine Pitrou> Use a function rather than a macro e6d3d88 <Antoine Pitrou> ARROW-7691: Check non-scalar Flatbuffers fields are not null Authored-by: Antoine Pitrou <antoine@python.org> Signed-off-by: Antoine Pitrou <antoine@python.org> commit 0326ea3 Author: Neal Richardson <neal.p.richardson@gmail.com> Date: Tue Feb 4 13:42:03 2020 +0100 ARROW-7751: [Release] macOS wheel verification also needs arrow-testing This addition follows the pattern of `test_source_distribution` (as it is in apache#6344). There are also two error message patches to make them consistent with everywhere else that references this env var (though FWIW `testing/data` is still not correct in the verification script, it's `arrow-testing/data` 🤷♂). Closes apache#6345 from nealrichardson/flight-testing-data and squashes the following commits: a29e88a <Krisztián Szűcs> factor out testing repository cloning df9ef25 <Neal Richardson> Move addition and fix lint e165d54 <Neal Richardson> Make sure macOS wheel verification has test data Lead-authored-by: Neal Richardson <neal.p.richardson@gmail.com> Co-authored-by: Krisztián Szűcs <szucs.krisztian@gmail.com> Signed-off-by: Krisztián Szűcs <szucs.krisztian@gmail.com> commit a605417 Author: Krisztián Szűcs <szucs.krisztian@gmail.com> Date: Tue Feb 4 12:50:50 2020 +0100 ARROW-7750: [Release] Make the source release verification script restartable Executing the verification script can take quite some time, so creating a new environment in case if anything fails is time consuming. Let the script reuse the same build directory for source release verification. Need to export `TMPDIR` environment variable. @kou shall we use an argument instead? Closes apache#6344 from kszucs/restartable-verification and squashes the following commits: 6d4723d <Krisztián Szűcs> Support for restarting the release verification script Authored-by: Krisztián Szűcs <szucs.krisztian@gmail.com> Signed-off-by: Krisztián Szűcs <szucs.krisztian@gmail.com> commit bc261d1 Author: liyafan82 <fan_li_ya@foxmail.com> Date: Mon Feb 3 21:08:10 2020 -0800 ARROW-7073: [Java] Support concating vectors values in batch We need a way to copy vector values in batch. Currently, we have copyFrom and copyFromSafe APIs. However, they are not enough, as copying values individually is not performant. Closes apache#5916 from liyafan82/fly_1125_veccat and squashes the following commits: 94b407c <liyafan82> Support dense union vector ee49dc6 <liyafan82> Add tests with null values ad33e23 <liyafan82> Rewrite tests with vector populator for result verification c89211a <liyafan82> Rewrite tests with vector populator and provide static utility 7c13ede <liyafan82> Support concating vectors values in batch Authored-by: liyafan82 <fan_li_ya@foxmail.com> Signed-off-by: Micah Kornfield <emkornfield@gmail.com> commit 4b54997 Author: Antoine Pitrou <antoine@python.org> Date: Tue Feb 4 06:44:19 2020 +0900 ARROW-7726: [CI] [C++] Use boost binaries on Windows GHA build The binaries are installed using Chocolatey, which takes a bit of time (it's a 2+GB install...), but less so than recompiling Boost from scratch during the CMake build. [skip appveyor] Closes apache#6325 from pitrou/ARROW-7726-download-boost-gha and squashes the following commits: e877622 <Antoine Pitrou> Revert "Try a more flexible way of finding Boost" eb5db8f <Antoine Pitrou> Try a more flexible way of finding Boost d570649 <Antoine Pitrou> ARROW-7726: Use boost binaries on Windows GHA build Authored-by: Antoine Pitrou <antoine@python.org> Signed-off-by: Sutou Kouhei <kou@clear-code.com> commit cb81f7d Author: Krisztián Szűcs <szucs.krisztian@gmail.com> Date: Mon Feb 3 17:30:19 2020 +0100 ARROW-7735: [Release][Python] Use pip to install dependencies for wheel verification The wheel verification script fails for python 3.5. At the same time the wheel properly works for python 3.5 docker images without conda environment. Conda forge doesn't maintain packages for python 3.5 anymore and something must have mixed with the numpy versions. This change fixed the wheel verification locally for me. Closes apache#6339 from kszucs/wheel-verification and squashes the following commits: 3e96949 <Krisztián Szűcs> remove pytest verbose flags 026e5fb <Krisztián Szűcs> use pip to install dependencies for wheel verification Authored-by: Krisztián Szűcs <szucs.krisztian@gmail.com> Signed-off-by: Krisztián Szűcs <szucs.krisztian@gmail.com> commit 68c2f3c Author: Krisztián Szűcs <szucs.krisztian@gmail.com> Date: Mon Feb 3 17:13:40 2020 +0100 ARROW-7729: [Python][CI] Pin pandas version to 0.25 in the dask integration test Additionally test agains dask's latest release not just the master revision. Closes apache#6326 from kszucs/dask-pandas-pin and squashes the following commits: b5cb40e <Krisztián Szűcs> pin pandas depending on dask's version 083221c <Krisztián Szűcs> pin pandas in the dask integration test Authored-by: Krisztián Szűcs <szucs.krisztian@gmail.com> Signed-off-by: Krisztián Szűcs <szucs.krisztian@gmail.com> commit d091894 Author: Andy Grove <andygrove73@gmail.com> Date: Mon Feb 3 08:18:12 2020 -0700 ARROW-7684: [Rust] Example Flight client and server for DataFusion This PR adds DataFusion examples for a Flight client and server where the client can send a SQL query to the server and then receive the results. I have manually tested with a Java client as well to confirm that it works. Closes apache#6308 from andygrove/datafusion-flight-example and squashes the following commits: 788feef <Andy Grove> code cleanup 9c47338 <Neville Dipale> Complete flight client's record batch reader 1337b98 <Andy Grove> parse recordbatch 459bef3 <Andy Grove> client parses schema from ipc batches 31c894b <Andy Grove> update release test script efe05ae <Andy Grove> update release test script 5ecea83 <Andy Grove> formatting 8b419da <Andy Grove> update release test script 03d2c84 <Andy Grove> client streams results 0a39a51 <Andy Grove> client can stream batches e72c605 <Andy Grove> add starting point for flight-client example ab28da8 <Andy Grove> get schema from query plan instead of from first batch 0901a3f <Neville Dipale> Merge branch 'datafusion-flight-example' of https://github.com/andygrove/arrow into datafusion-flight-example ad2e3b0 <Neville Dipale> send schema before batches 996f2a4 <Andy Grove> Use PARQUET_TEST_DATA env var 260f9ca <Neville Dipale> fix license violation 516b66d <Neville Dipale> add helpers to convert record batch to flight data proto message 6beb4ea <Andy Grove> WIP example Flight server for DataFusion Lead-authored-by: Andy Grove <andygrove73@gmail.com> Co-authored-by: Neville Dipale <nevilledips@gmail.com> Signed-off-by: Andy Grove <andygrove73@gmail.com> commit 19b0d4b Author: Krisztián Szűcs <szucs.krisztian@gmail.com> Date: Mon Feb 3 08:35:27 2020 -0500 ARROW-7466: [CI][Java] Fix gandiva-jar-osx nightly build failure Closes apache#6331 from kszucs/ARROW-7466 and squashes the following commits: d50b8c8 <Krisztián Szűcs> don't install already installed python3 d956297 <Krisztián Szűcs> re-enable steps 421142d <Krisztián Szűcs> start all arguments at the same column... 2131836 <Krisztián Szűcs> travis multi line string b50865e <Krisztián Szűcs> use travis_build_dir 6f1beb6 <Krisztián Szűcs> debug paths 7b054ec <Krisztián Szűcs> queue path 6929f3d <Krisztián Szűcs> fix crossbow path 2a2d7c3 <Krisztián Szűcs> deploy using crossbow Authored-by: Krisztián Szűcs <szucs.krisztian@gmail.com> Signed-off-by: François Saint-Jacques <fsaintjacques@gmail.com> commit ab3d86e Author: Sutou Kouhei <kou@clear-code.com> Date: Mon Feb 3 11:56:47 2020 +0100 ARROW-7736: [Release] Retry binary download on transient error It makes binary verification more robust. Closes apache#6335 from kou/release-verification-binaries-retry and squashes the following commits: 38944a9 <Sutou Kouhei> Retry binary download on transient error Authored-by: Sutou Kouhei <kou@clear-code.com> Signed-off-by: Krisztián Szűcs <szucs.krisztian@gmail.com> commit 4c7bfc7 Author: liyafan82 <fan_li_ya@foxmail.com> Date: Sun Feb 2 20:28:40 2020 -0800 ARROW-7301: [Java] Sql type DATE should correspond to DateDayVector According to SQL convertion, sql type DATE should correspond to a format of YYYY-MM-DD, without the components for hour/minute/second/millis Therefore, JDBC type DATE should correspond to DateDayVector, with a type width of 4, instead of 8. Closes apache#5944 from liyafan82/fly_1203_date and squashes the following commits: a6de377 <liyafan82> Remove division in time conversion be73192 <liyafan82> Resolve comments eea8b79 <liyafan82> Sql type DATE should correspond to DateDayVector Authored-by: liyafan82 <fan_li_ya@foxmail.com> Signed-off-by: Micah Kornfield <emkornfield@gmail.com> commit 85996e6 Author: tianchen <niki.lj@alibaba-inc.com> Date: Sun Feb 2 19:51:30 2020 -0800 ARROW-6871: [Java] Enhance TransferPair related parameters check and tests Related to [ARROW-6871](https://issues.apache.org/jira/browse/ARROW-6871). TransferPair related param checks in different classes have potential problems: i. splitAndTansfer has no indices check in classes like VarcharVector ii. splitAndTranser indices check in classes like UnionVector is not correct (Preconditions.checkArgument(startIndex + length <= valueCount)), should check params separately. iii. should add more UT to cover corner cases. Closes apache#5645 from tianchen92/ARROW-6871 and squashes the following commits: f3b897d <tianchen> fix style 0d3c7ea <tianchen> add benchmark 01f9a48 <tianchen> revert changes in copyFrom a22d58a <tianchen> ARROW-6871: Enhance TransferPair related parameters check and tests Authored-by: tianchen <niki.lj@alibaba-inc.com> Signed-off-by: Micah Kornfield <emkornfield@gmail.com> commit af24bb7 Author: Antoine Pitrou <antoine@python.org> Date: Sun Feb 2 19:47:01 2020 -0800 ARROW-6724: [C++] Allow simpler BufferOutputStream creation Make the initial capacity argument optional. Closes apache#6327 from pitrou/ARROW-6724-bufferoutstream-simpler-ctor and squashes the following commits: b563f46 <Antoine Pitrou> ARROW-6724: Allow simpler BufferOutputStream creation Authored-by: Antoine Pitrou <antoine@python.org> Signed-off-by: Micah Kornfield <emkornfield@gmail.com> commit 49aada2 Author: David Li <li.davidm96@gmail.com> Date: Sun Feb 2 19:42:55 2020 -0800 ARROW-7734: [C++] check status details for nullptr in equality When checking statuses for equality, check to make sure that both have status detail objects before proceeding to compare those objects. Closes apache#6332 from lidavidm/arrow-7734 and squashes the following commits: 9084bce <David Li> ARROW-7734: check status details for nullptr in equality Authored-by: David Li <li.davidm96@gmail.com> Signed-off-by: Micah Kornfield <emkornfield@gmail.com> commit 942a4d0 Author: liyafan82 <fan_li_ya@foxmail.com> Date: Sun Feb 2 19:39:48 2020 -0800 ARROW-6738: [Java] Fix problems with current union comparison logic There are some problems with the current union comparison logic. For example: 1. For type check, we should not require fields to be equal. It is possible that two vectors' value ranges are equal but their fields are different. 2. We should not compare the number of sub vectors, as it is possible that two union vectors have different numbers of sub vectors, but have equal values in the range. Closes apache#5544 from liyafan82/fly_0930_share and squashes the following commits: d6ef3d2 <liyafan82> Refine test case c008289 <liyafan82> Resolve test failure after rebasing c515393 <liyafan82> Rule out the change for union type comparison bab7402 <liyafan82> Compare fields for all vectors except union vectors 5b2225e <liyafan82> Fix the bug with decimal vector 4d8b570 <liyafan82> Fix problems with current union comparison logic Authored-by: liyafan82 <fan_li_ya@foxmail.com> Signed-off-by: Micah Kornfield <emkornfield@gmail.com> commit bd08d0e Author: Antoine Pitrou <antoine@python.org> Date: Fri Jan 31 07:07:54 2020 +0900 ARROW-7712: [CI] [Crossbow] Delete fuzzit jobs We will focus on OSS-Fuzz, now that we have been accepted there. Also add an OSS-Fuzz badge in the README. Closes apache#6328 from pitrou/ARROW-7712-delete-fuzzit-jobs and squashes the following commits: 6c6d2c4 <Antoine Pitrou> Remove remaining fuzzit-related configuration a6abaa9 <Antoine Pitrou> ARROW-7712: Delete fuzzit jobs Authored-by: Antoine Pitrou <antoine@python.org> Signed-off-by: Sutou Kouhei <kou@clear-code.com>
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We're not testing the dataset feature in the verifications scripts yet.